Lycium barbarum (goji berry): 132630005
Help
Entry
132630005 CDS
T09483
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132630005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbb02000
]
132630005
04147 Exosome [BR:
lbb04147
]
132630005
04090 CD molecules [BR:
lbb04090
]
132630005
Enzymes [BR:
lbb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
132630005
Transporters [BR:
lbb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
132630005
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132630005
CD molecules [BR:
lbb04090
]
Proteins
132630005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_15
AAA_5
nSTAND1
APS_kinase
SbcC_Walker_B
AAA_25
DUF815
DUF87
Rad17
DUF4349
Motif
Other DBs
NCBI-GeneID:
132630005
NCBI-ProteinID:
XP_060201474
LinkDB
All DBs
Position
3:5154910..5163306
Genome browser
AA seq
1337 aa
AA seq
DB search
MSQDCEEIKTIEHWKWSEMQGLELVVSEENNHNNNKENSSNPTIENNQETKQETKMEVIE
ENKERGDVEKPSTPLPAVGFGELFRFADSLDYVLMAIGSLGAFVHGCSLPLFLRFFADLV
NSFGSYANDVDKMTQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEA
ALNQDISYFDTEVRTSDVVSAINTDAVVVQDAISEKLGNFIHYMATFLSGFVVGFTAVWQ
LALVTLAVVPLIAVIGAIYTMTSAKLSSKSQEALSKAGNIVEQTVVQIRTVLAFVGESKA
MQAYTAALRVSQKIGYKSGFSKGLGLGATYFTVFCCYALLLWYGGYLVRHHFTNGGLAIA
TMFAVMIGGLALGQSAPSMSAFAKARVAAAKIFRIIDHKPSVDRNAKTGLELDTVSGQVE
LKNVEFSYPSRPEIKILNNFNLVVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQLLL
DGNDIKTLKLKWLRQQIGLVSQEPALFATSIKENILLGRPDASQIEIEEAARVANAHSFI
IKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEAL
DRFMIGRTTLVIAHRLSTIRKADLVAVIQQGSVSEIGSHDELMCKGENGMYAKLIKMQEA
AHETALSNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDAAYS
SYRHEKLAFKDQASSFGRLAKMNSPEWTYALIGSIGSVICGSLSAFFAYVLSAVLSVYYN
PDHAYMSKQIAKYCYLLIGVSSAALIFNTLQHYYWDVVGENLTKRVREKMLAAVLKMEMA
WFDQEENDSSRIAARLSLDANNVRSAIGDRISVIMQNSALMVVACTAGFVLQWRLALVLI
AVFPVVVAATVLQKMFMKGFSGDLEAAHAKATQLAGEAVANVRTVAAFNSETKIVNLFDS
SLQIPLRRCFWKGQIAGSGYGIAQFLLYASYALGLWYASWLVKHGISDFSKTIRVFMVLM
VSANGAAETLTLAPDFIKGGQAMRSVFELLDRKTEVEPDDPDATAVPDRLRGEVEFKHVD
FSYPTRPDVSIFRDLNLRARAGKTLALVGPSGCGKSSVIALIERFYEPSSGRVIIDGKDI
RKYNLKSLRRHIAIVPQEPCLFATTIYENIAYGHETSTEAEITEAATLANAHKFISALPN
GYKTFVGERGVQLSGGQKQRIAIARAFLRKAELMLLDEATSALDAESERCVQEALDRACA
GKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYSDGIYARMIQLQRFSHGEA
VNMVTGSTSSARPKEED
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattgtgaggagataaagaccattgaacattggaaatggtctgaaatgcaa
ggtcttgaacttgttgtctctgaagaaaacaatcacaacaacaacaaagaaaattcaagc
aaccccacaatagaaaataatcaagaaaccaaacaagaaacaaaaatggaagttattgaa
gaaaataaagaaaggggtgatgttgaaaaaccaagtacaccactacctgcagttggtttt
ggtgaactttttagatttgctgatagtttggactatgtgttaatggcaattggttcactt
ggtgcttttgtccatggttgttctttgcctttgtttcttagattctttgctgatcttgtt
aattcatttggctcttatgctaatgatgttgataagatgactcaagaagtcttaaagtat
gcattttactttcttgtagtgggtgctgcaatatgggcatcttcatgggcagaaatatca
tgttggatgtggactggagagagacaaacaacaaagatgaggatcaaatacttagaggca
gctttaaaccaagatatttcatactttgatacagaagttagaacttctgatgttgtttct
gcaattaacactgatgctgtagtggtccaagatgccattagtgagaagttgggtaatttc
attcattatatggctacatttttgtctggatttgttgtgggatttacagcagtgtggcaa
ctagctcttgttactcttgctgtagttccactaattgctgtaattggtgctatctacact
atgacatcagccaaattgtcaagcaaaagtcaagaagcactttcaaaggcaggcaacatt
gtggaacagacagtagttcaaattcggacggtattggcgtttgttggtgagtcaaaagca
atgcaagcatacacagcagcacttagagtttctcagaagattggctataaaagtggattt
tcaaaaggattaggacttggagctacatattttactgtcttctgttgttatgctcttctt
ttatggtatgggggctatttggttaggcatcatttcaccaatggaggacttgccatagca
acaatgtttgctgtcatgataggtggactggcattgggacaatctgctcctagcatgagt
gcatttgcaaaggctagagttgcagctgccaagattttccggatcatcgatcacaaaccg
agcgttgacagaaatgccaaaacggggttggaattagataccgttagtggccaagtagag
cttaaaaatgtcgagttctcctatccgtcgaggccagaaatcaagattctcaacaatttc
aacctcgttgttcctgctggaaagaccatcgctttagttggaagcagtggctccgggaaa
agcaccgtggtctcccttatcgaaagattctatgatcccacctcaggacaacttttactt
gatgggaatgacataaagacactgaagttaaaatggctaaggcagcaaatcgggctagtg
agccaagaaccagcactttttgctacaagcatcaaagaaaacatactattagggaggcca
gatgcatcacaaattgagattgaagaagctgctagagttgccaatgcccattctttcata
atcaaacttcctgatgggtttgatactcaggtaggggagagaggattacaattatcaggt
ggacagaagcaaagaattgctatagcgagggccatgcttaaaaacccggccatccttctt
ttagatgaggcaactagtgctttagactctgaatcggaaaagctagtgcaggaggctcta
gacaggttcatgatcggacgaacgacacttgtaattgctcatcgcctgtctactatccgg
aaggctgacctggtcgctgtaatacaacaaggtagtgtttctgaaattggaagccatgat
gagcttatgtgtaaaggagaaaatggtatgtatgccaagctcatcaaaatgcaagaagcg
gctcatgaaacagctcttagtaatgccagaaagagcagcgcgaggccctctagtgcaagg
aactctgtgagctcaccaatcataactagaaactcttcctatggtcgatcaccttactct
cgccggttatccgacttttccacctcggacttcagcctctcccttgatgctgcatattct
agttaccgacatgaaaagcttgcattcaaggaccaagctagttcgttcggccggcttgcg
aaaatgaattctcctgagtggacttatgctttaattggttccataggttccgtcatctgt
ggttcgcttagtgctttctttgcgtacgtcctgagtgctgtccttagcgtgtactacaat
ccggaccatgcttacatgagcaaacaaatcgcaaaatattgctatcttttgattggagtt
tcatcggctgcgctcattttcaatactctacagcattactactgggatgtagtgggggag
aatttgacgaaacgggtgagagagaaaatgctggcggcggtgcttaaaatggaaatggcg
tggttcgatcaggaagagaacgatagttcgagaattgcagccaggctgtctctggatgcc
aacaatgttaggtcagctattggggatagaatctctgtcattatgcagaactctgctctc
atggtagtcgcgtgcactgctggattcgtattgcagtggcgtctggccctcgtcctcatt
gctgtctttccggtggttgttgctgcaactgttttacagaaaatgttcatgaagggattc
tcaggagacttagaagctgctcatgccaaagccacccaacttgcaggagaagctgtagct
aatgtaagaacagttgctgccttcaattcagaaacaaaaatagtcaacctattcgactcc
agcctccaaattccacttaggcgctgcttctggaagggacagattgcaggaagtggttac
gggattgctcaatttttgctttatgcttcctacgcgcttggcctttggtacgcctcatgg
cttgtcaagcatgggatctctgacttctcaaagacgatccgtgttttcatggtcctcatg
gtttccgctaacggtgcagctgaaacattgactttagctcccgacttcatcaagggtggc
caagcgatgcgttcggttttcgaactcctcgaccggaaaacagaagtcgagcctgatgat
ccggatgccactgcagtgcccgatcgtcttcgtggtgaagtggaatttaagcatgtggac
ttttcatatcccactaggcccgacgtgtcaattttccgtgatttgaatctacgtgctcga
gctggaaagacacttgcacttgttggaccgagcggatgtggaaagagctcggtcattgca
cttatagagcggttttacgagccgtcatctgggcgtgtcattatcgacggcaaggatatt
cgaaagtacaaccttaaatctttgagaaggcacatcgccatagtcccacaagaaccttgc
ctttttgctaccaccatctatgagaacattgcttatggacatgaaacatcaaccgaagct
gagataaccgaagcagcaacattggcgaacgcccacaagttcatatctgcattacctaat
ggctacaaaacatttgtcggagaaaggggagttcagttgtccggtggacaaaagcaaaga
atcgccattgctcgtgctttcctaaggaaagctgagcttatgctgcttgatgaagcaaca
agtgcactcgatgcagagtccgaaagatgtgtgcaagaagcgttggatcgtgcatgtgca
ggaaagaccacgatcgtggttgcacataggctatccacaatcagaaatgcgcatgtgata
gcggtgatagatgacgggaaagtggcggaacaaggttctcattctcatctgttgaaaaac
tactcagacgggatttatgcacgtatgatccaactacaaagatttagtcacggggaagct
gtgaatatggtaacaggctcgacgtcttctgcacgtcccaaggaagaagattga
DBGET
integrated database retrieval system
