Lycium barbarum (goji berry): 132631615
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Entry
132631615 CDS
T09483
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132631615
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132631615
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132631615
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132631615
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
132631615
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
132631615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Trehalose_PPase
DNA_repr_REX1B
DUF4763
HTH_63
DUF6779
Motif
Other DBs
NCBI-GeneID:
132631615
NCBI-ProteinID:
XP_060203226
LinkDB
All DBs
Position
3:complement(92841330..92852099)
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AA seq
334 aa
AA seq
DB search
MSWCTIESDPGVFTELMQQMQVKGVQVEELYSLDLDELNSLRPVYGLIFLFKWRPGEKDD
RLVIKDPNPNLFFASQVINNACATQAILSILLNSSDVDVGPELSALKEFTKNFPPELKGL
AINNSEAIRTAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPIS
LGPCSGGQGDIEWLRMVQPVIQERIERYSQSEIRFNLMALVKNRKEVYTAELKELQKKRE
RILQQLAASQSERMVDSNQVESLNKSLAEVNSCIEAVSDKILREEEKFKKWKTENIRRKH
NYIPFLFNFLKILAEKKQLRPLIEKAKQKTTNPR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggtgcactatcgagtctgatcccggggtttttaccgaacttatgcagcagatg
caagtaaaaggtgtacaggttgaagagttgtattccttggatcttgatgagctcaacagt
cttaggcccgtgtatggcttgatattccttttcaaatggcgtcctggtgaaaaagatgat
cgccttgtgatcaaggacccaaacccaaacttattctttgcgagtcaggtgataaacaat
gcctgtgctacccaagcaatcctttcaattctcctgaacagttcagatgttgatgttggc
ccagaactgtcagcactaaaagaattcacaaagaatttcccgccggagcttaaaggttta
gctatcaacaacagtgaagcgattcgtacagcccataatagttttgctagacctgagcca
tttgtgcctgaggagcagaaagctgctggaaaagatgatgatgtataccattttattagc
tatatacctgtggacggtgtgttgtatgagctcgatggattgaaggagggaccaatcagt
cttgggccatgctctggtgggcaaggtgatatcgagtggttgcgcatggtgcaaccagta
attcaggaacgtattgagaggtattcgcagagtgaaataagattcaatctgatggcttta
gtaaaaaacaggaaagaggtgtatactgcagagctgaaggagcttcagaagaagagggag
cgtattctgcagcagctggctgcatcccagtcggagagaatggttgatagcaaccaagtg
gagtccctaaataaatccttagcagaagtaaattcttgcattgaagctgttagtgataag
atattgagggaggaggagaagttcaagaaatggaaaactgaaaatatccgtcggaagcac
aactacataccctttctgttcaactttttgaaaatcctagctgaaaagaagcagctgaga
cctcttatagagaaggccaaacagaaaaccaccaatcctaggtga
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