Lycium barbarum (goji berry): 132631872
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Entry
132631872 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132631872
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132631872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132631872
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
132631872
DNA repair and recombination proteins [BR:
lbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132631872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
132631872
NCBI-ProteinID:
XP_060203571
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All DBs
Position
1:11709260..11712586
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AA seq
467 aa
AA seq
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MCSSKKQAGVVDISPQTPSHINGRPVFQPYSNRDPLLARHNSHKKSTNFKISSPSSTTNN
NSAAKVKNSVLTTPPISPKIKSPRQQTSSEKIVTPKKSPSFKISTPPVSPKIKSPRQQTS
SEKILTPKKSPSFKISTPPVSPKIKSPRQQTSSEKILTPKKSPNLQISTPLASPKIKSPR
QQVIKKVNTSCEKIVTTKKGNTDSTILVKDSCKKDSSFMILEVAGSIAAARREQVANMQV
QRKKKIAHYGRTNSVKLVTPLDSSNNSSFKEGKRCSFITPNSDPVYIAYHDEEWGVPVHD
DNLLFELLVLTVAQVGSDWTSVLKKRQDFRDAFSGFDPEIVAKYNEKKINSTSTEYSIEM
SQVRGVVDNSKRILEIKKQFGSFQKYLWGFVSNKPIATQYKACNKIPVKTSKSEAMSKDM
VKRGFRYVGPTVIHSFMQAVGLTNDHLLTCPRHVQCAALATHPPIAL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcttccaagaaacaagcaggggttgttgatatttccccacaaacaccctctcat
atcaatggacgccctgtttttcaaccatatagcaatagagaccctctcttggcacgccac
aattcccacaaaaaatcaacaaatttcaagatttcttctccttcttcaacaacaaataac
aatagtgctgcaaaagtgaaaaattcagtactaacaactcctcctatctctcctaaaatc
aagtctcctagacaacaaacaagtagtgagaaaattgtgacacctaaaaagtcacctagt
ttcaagatttcaactcctcctgtttctcctaaaattaagtcccctagacaacaaacaagt
agtgagaaaattttgacacctaaaaagtcacctagtttcaagatttcaactcctcctgtt
tctcctaaaattaagtcccctagacaacaaacaagtagtgagaaaattctgactcctaaa
aagtcacctaatttacagatttcaactcctctcgcttctcctaaaatcaagtcccctaga
caacaagttatcaagaaagtgaatacaagttgtgagaaaattgtgacaactaaaaaagga
aatactgattctacaatcttggtgaaggattcttgtaaaaaagactcttcctttatgatt
cttgaagttgctggaagcatagcagcagcaagaagggaacaagttgccaacatgcaagtg
caaagaaaaaagaaaattgcacattatggaagaactaattctgtcaaattagtcactccg
cttgattcttccaataattcaagttttaaagagggcaaaagatgcagctttatcacacct
aattctgaccctgtttatattgcataccatgatgaagaatggggagttcctgtccatgat
gataatctgctatttgaattgttggtattaactgtggctcaagttggatcagactggact
tcagtgttaaagaaaaggcaagatttcagggatgccttttcaggatttgatccagaaatt
gttgcaaaatacaatgaaaagaagataaattcaacaagtactgaatatagcattgagatg
agccaagttcgaggggttgttgacaattctaaaagaattttagagatcaagaaacaattc
gggtcgttccaaaagtacttgtggggatttgtgagcaacaagcccattgcaacacaatac
aaggcctgcaacaaaattccagtaaagacatcaaaatcagaagcaatgagcaaagatatg
gtgaaaagaggattcagatatgttggcccaactgttatacactccttcatgcaggcagtt
gggcttactaatgaccacctattaacctgcccaagacatgtccaatgtgctgccttggca
actcatccacctattgctctatga
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