Lycium barbarum (goji berry): 132633017
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Entry
132633017 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132633017
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132633017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132633017
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
132633017
DNA repair and recombination proteins [BR:
lbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132633017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
132633017
NCBI-ProteinID:
XP_060205185
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All DBs
Position
3:140189647..140198569
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AA seq
398 aa
AA seq
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MSGGPRVKSTNNVDSEVRSVLGPAGNKARSIELRKPIEKPVKTTNNKTPESEESKGKKFQ
GTDPLSKAGSKKSGAVPSILRQQQDHRTMMMRPNLSLNASCSSDASTDSSHSRASTGRLS
RGSSVTPTGGRRKQCSPKVVKSVKIGKPVVGEAESLSPSPATGDGSVMKKRCAWVTPNTD
PAYAAFHDEEWGVPVHDDKKLFELLSLCTALAELSWPAILSKRHTFREVFQNFDPVAVSK
LNDKKIAPPGSPASSLLSEVKLRAIIENARQTCKIIDELGSFDKYIWGFVNNNKPIVSQL
RYARQVPMKTSKAEGISKDLVKRGFRGVGPTVVYSFMQVAGITNDHLISCFRFHDCVAAS
DGTDKDDGLAAKTEVKQQLKDETEMGLIRAIDDFNLSS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaggcccaagggttaaatcgacaaacaatgttgactccgaagtccgatcagta
ctcggcccggcaggtaacaaagccagatccattgaattacgaaagcccatcgaaaagccc
gttaagactactaacaacaaaacacctgaaagtgaagagtctaagggtaagaaattccag
ggaactgatccgttgtcaaaagctggttctaagaaaagtggagctgtgccttctattttg
agacaacaacaagaccataggactatgatgatgaggcctaatttgtctctaaatgcgtcg
tgttcatctgatgcttcaacggattcttctcatagtcgagcatcgacggggagattgagc
cgtggtagtagtgtgaccccgacggggggcagaaggaagcaatgtagcccgaaagttgtt
aagtctgtgaaaattgggaaacctgttgttggtgaagctgagagtttgtctcctagtcct
gctaccggagatggttcggtgatgaagaaaaggtgtgcttgggtgacaccaaatactgat
ccagcctatgctgcttttcatgacgaggaatggggagttccagtccatgatgacaagaag
ctctttgaacttctcagtctatgcactgcattagctgaactctcatggccagcaattctc
agtaaaagacatacatttagagaagtctttcaaaattttgacccagttgcagtctcaaaa
ctaaatgacaagaagatagcaccaccaggaagtcctgccagctctcttttgtcagaggtg
aagttgcgggcaattattgaaaatgcacgccaaacctgtaagataatcgatgaacttgga
tcttttgacaaatacatatggggttttgtgaacaacaacaaacctatagttagtcagtta
cgatatgcaaggcaggtgccaatgaagacatcaaaagctgaaggcataagtaaagaccta
gttaaaagaggattcagaggagttggacctactgttgtgtactcgttcatgcaagtagct
ggaatcacaaacgaccatctcatcagttgcttcagatttcatgattgtgtagctgcaagt
gatggaacggataaagatgatggccttgcagccaagactgaagtgaagcaacaactcaag
gatgaaactgagatgggcctgataagagctattgatgacttcaatttatcctcgtag
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