Lycium barbarum (goji berry): 132633506
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Entry
132633506 CDS
T09483
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132633506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132633506
03036 Chromosome and associated proteins [BR:
lbb03036
]
132633506
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132633506
Coactivators
SAGA/TFTC/STAGA complex
132633506
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132633506
STAGA complex
132633506
TFTC complex
132633506
SAGA complex
132633506
SLIK complex
132633506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
132633506
NCBI-ProteinID:
XP_060205956
LinkDB
All DBs
Position
3:147661370..147669420
Genome browser
AA seq
626 aa
AA seq
DB search
MAEIPSSSPKSNPIIEPGTATTTSGITMTTISQSPSIEMPLNQSQSQQQQQMQQQMQQQQ
QQLSQSQQHQMQQQQNNNNNNSSSSNNNLMSAAASNFTMQRSPSMSRLSQFQMQQQQQQQ
LGLMRQQSGGGLYGQMNFGGGSTSLQQQQQQLQLQQQLQQQQQQQQQQQNQQQQQLSGQN
QQQQIGGQMSSGNLNRAALLGQTGHLPMLSGQAAAVAQLNLQPQFLNSPRQKAGLMQGNQ
FHTGNSHGQSLQGIQPMGVMGSLNMNSQLRANGALAYAQQQRVNQNQLRQQLSQQNPLTT
TQKMSAQSLPRTSFINSQLPGLTQNGQSAMMQNNSSQQQWLKQMPAISTPNSPSYRLQHQ
RQQQMLMQQQLASPQQLLQNSMGLNPQQLSQIVQQQQQIGHPQMQQQQQQQPQQQQQQPQ
QLSHQQQASPRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSSQGTEASNQLLGKRKIQD
LVSQVDSQGKLDPEVEDLLLEIADDFIDSVTTFACNLAKHRKSSTLESKDVLLHLEKNWH
LTIPGFSSEERKHYPENSPSDLHKKRLDVIRTLMEASQTETSTDSSAKETVRPAVGDSNH
MIRPPSSDKLVSHSNASQMLHEMTRF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaattccatcttcttccccgaaatcaaaccctataatcgaacccggaacagca
acaacgacgtccggaatcaccatgactacaatctcacaatcgccgtcaattgagatgccg
ttaaaccaatctcagtctcagcaacaacaacaaatgcaacaacagatgcagcagcagcaa
caacaattgtcgcaatctcaacaacaccaaatgcagcagcagcagaataataataataat
aattctagtagtagtaacaacaacttaatgtcagctgctgcatctaatttcacgatgcag
agatcgccttcaatgtcgaggttgagtcaatttcaaatgcagcagcagcagcaacaacaa
ttaggtttaatgaggcaacaatcaggaggagggctttatggtcaaatgaattttggaggc
ggaagtacttcactccagcaacaacaacaacagttacaattgcagcaacaattgcaacaa
caacagcaacaacaacaacaacaacagaatcaacaacagcagcaactaagtggccagaat
caacaacaacaaataggtggccagatgagtagcggaaatttgaatagggcagctttgttg
ggacagactggtcatttgcccatgttatctggacaagctgctgctgttgctcagctcaat
ttgcaacctcaatttttgaattcgccacggcagaaggctggtctaatgcaggggaatcag
ttccatacagggaattcccatggccagtccttgcagggtatacagccgatgggagtgatg
ggatctctgaacatgaactctcagttaagggcaaacggggccctggcatatgcacaacaa
caaagggtgaatcaaaatcagttgaggcagcagttgtcccagcaaaatcctctcaccact
actcagaaaatgtcggctcaaagccttccaaggacgtcctttattaactctcagttacct
gggttgactcagaatggacaatctgcgatgatgcagaacaattcatcacaacagcagtgg
ttgaagcaaatgcctgcaatttctactcctaattccccttcctatcgtcttcaacatcag
aggcagcaacaaatgcttatgcagcagcaattagcttcacctcaacagttgctccaaaat
tcaatgggtttgaacccacagcaactatcccaaattgtacaacagcagcaacagattggg
caccctcagatgcagcaacagcagcagcagcagccacagcagcaacaacaacagccacaa
cagctttcgcatcaacaacaggcttctccaaggatggctgccccagctggccaaaaatct
ctcagtttaactggatctcaaccagatgctactggatccggaacaactactccagggggt
agttcaagtcaggggactgaagcaagcaatcagcttcttggaaagagaaagatacaggat
ttggtttcacaggtggattcacagggaaagcttgatcctgaagttgaagatcttcttcta
gagattgctgatgactttattgattcggttactacatttgcttgcaatttggcaaaacat
cggaaatcttcaactttggagtccaaggatgtactgttacatctagagaaaaactggcat
ttgactattccaggcttttcaagcgaggagaggaaacactatccagaaaattcaccaagt
gatctccacaaaaagcgtttggatgtgatacgtaccttgatggaggcctcacaaacagaa
acaagtacagatagtagtgctaaggagacagtcagaccagcagtgggtgactcaaatcac
atgatcagacctccaagttcagacaaattggtttcacactctaatgcttctcaaatgctg
catgagatgacaaggttttga
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