Lycium barbarum (goji berry): 132644788
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Entry
132644788 CDS
T09483
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132644788
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
132644788
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
YscO
ABC_tran
AAA_27
NACHT
Motif
Other DBs
NCBI-GeneID:
132644788
NCBI-ProteinID:
XP_060217377
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Position
6:90541869..90577974
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AA seq
1050 aa
AA seq
DB search
MTERRAKRPKITRGEDDYMPGNITEIELHNFMTFSKLTCKPGSRLNLVIGPNGSGKSSLV
CAIALGLGGEPQLLGRASSIGAFVKRGEESGYIKISLRGETKEDQLTIVRKIDTRNKSEW
IFNGKTVPKKNVTDIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPRLP
VQHVDLISKSEELKKSERTVKSGRETLDQLKEVNSQLERDVERLRQREHLLAQAESMRKK
LPWLKYDAKKAEFLEAKRQEQDAKKKLDEAAENLNELMEPIEEKKQEKAERDAKCKKVNG
LLGDNSNKRMKLLDQDSRLDVQVDGKYKEMEDLRKQEESRQRRISKAQEDLRAAELELAN
LPPYERPRDKIDSLGSKILELQDGARELRSQKSEIERTLERNRTTFRQCSDKLKEMENTN
NKKLRALQISGAEKIFEAYNWVQEHQHQFNKSVYGPVLLEVNVSNRIHADYLEGHVPGYL
WKAFITQDAADRDLLVRNMRSFDVAIINLADESRSRVPLQVTEEMRILGIDSRLDQVFDA
PDAVKEVLISQFGLENSYIGSRETDKRADEVLQLGIFDLWTPENHYRWTKSRYGGHISGS
VESVNRSRFLLCNVDAGEVERLKSRKLELDKSISTLEDNLRAVKSELRNIEDEGAKLERQ
REEIINESLLENKRRREMENRVKQRVMNLKSLEREDDLDSVSAKLIDQIKAMKIQRFQLA
MDIKNLLIDAVAYRRSYAEHNMASLELVLKIKEMEANVKHQEKFAMQASLHYEYCKKETE
ECRRQLEVAKRHAESVAIITPELEQAFCEMPSTIEELDAAIQDTISQANSILFLNHNVLE
EYETRQKKIESLSESQEMEEEKLSNLINEINALKERWLPTLRSLVSQINQTFSRNFQEMA
VAGEVSLDEHDMDFDKYGILIKVKFRETGQLQVLSAHHQSGGERSVSTILYLVSLQDLTN
CPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPNLEYSEACSILTVM
NGPWIEQPSKVWSGGESWRSVMGLASVAAD
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacggagggctaaacgccctaaaatcacaaggggcgaagatgattatatgcca
ggaaatataactgagattgagcttcataacttcatgacattcagcaagttgacatgcaaa
ccaggctcccgattaaatctcgtaattggaccaaatggctccggaaagagttctctagtc
tgtgcaatagcactcggtcttggtggtgagcctcagcttttggggagggcttctagtatt
ggagcatttgtgaagcgcggggaggagtcagggtacatcaagatttccttgagaggggaa
accaaagaggaccagttaactatcgtgcggaaaatagatacacggaacaagtctgagtgg
atttttaatggaaaaactgtgccaaagaagaatgtaactgatataattcaaaggttcaat
atccaagtcaacaacttgactcaatttctacctcaggacagggtttgtgagtttgcaaaa
ttgacgcctgttcaactccttgaagaaactgaaaaggctgtgggtgatcctcggttacca
gtccagcatgtagatcttattagcaaaagtgaggagctgaagaagtctgaacgaactgtg
aagagcggcagagagacattggatcagctgaaggaagtcaattctcaacttgaaagagat
gtggagcgtctccgccagagagagcacctcctagcacaggctgaatccatgagaaagaaa
ttgccatggctgaagtacgatgctaagaaggctgagtttctggaagccaaaaggcaagag
caagatgccaaaaagaagctggatgaagctgctgagaatttgaatgaactcatggaacct
atagaggaaaagaagcaagagaaagcagaacgagatgctaaatgcaaaaaagtaaatggc
ctgttgggtgacaatagcaacaagcgtatgaaacttctggatcaggatagccgtttggat
gttcaagtggatggaaaatataaagaaatggaagacttgaggaagcaagaagaatctcgt
caacgtagaatttcaaaagctcaagaagatcttagagctgccgaactggaactggcaaat
cttcctccttatgaacgtcccagagataaaattgatagtttgggttctaaaattttggag
ctgcaagatggtgcacgggaactaaggtctcagaaatcagaaatagaaagaacccttgag
cggaataggacaacattcagacagtgctctgacaaattgaaggagatggagaacacaaac
aacaaaaaattacgtgctttacagatttctggtgctgaaaagatatttgaagcttacaat
tgggttcaggagcatcaacatcaatttaataaatctgtatatggtccagttcttcttgag
gtcaatgtttccaatcggattcatgcagattacctagagggtcatgtgccaggttactta
tggaaggcctttataacacaagatgccgcagaccgtgacctcttagttagaaatatgcga
tcatttgatgttgctattatcaatttagcagatgaaagtcggagccgtgttcccttgcaa
gttactgaggagatgcgtattctaggtattgattccagacttgaccaagtatttgatgct
cctgatgcagtcaaagaagttctaataagtcaatttgggctggaaaattcttacataggc
tcacgtgaaactgacaagagagcagatgaggtgttgcaattgggcatctttgatttatgg
acccctgaaaatcattacagatggaccaaatccagatatggtggtcatatttctggcagt
gttgaatcagtgaaccgctctcgctttttgctatgcaatgtggatgcaggggaagttgag
aggctcaaatcccggaaacttgagttggataaatccatctctacattagaagataatctc
agggcagttaagagtgagttgaggaacatagaggatgaaggtgccaaacttgaaaggcaa
cgtgaagagattataaatgagtcactacttgagaacaaaagaaggcgtgagatggaaaac
cgtgtcaaacagcgcgtgatgaacttgaaatctttggaaagagaggatgatctggatagt
gtatctgcaaagcttattgaccagattaaagctatgaagattcagagattccaacttgca
atggatattaagaatttactcattgatgctgtggcttaccgaagaagttatgctgaacat
aacatggcatcccttgaacttgtgctgaagattaaagagatggaagctaatgtgaagcac
caagaaaaatttgcaatgcaagcatctctgcattatgagtactgtaaaaaggagacggag
gaatgccgacgacaattggaagttgccaagaggcatgcagaatcagtagctattataact
ccagaacttgagcaggctttttgtgagatgccatctacaattgaggaattggatgcagct
attcaagataccatttctcaagccaactccattcttttcctgaaccataatgttctagaa
gagtatgaaacacgtcagaaaaaaatagaatctctttcggagagtcaagagatggaagaa
gagaagttaagcaacctcattaatgaaattaatgctttaaaggaaaggtggctaccaaca
ttaagaagtcttgtttctcaaatcaaccagacttttagccgcaatttccaagaaatggct
gttgcaggagaagtttcattagatgagcatgacatggactttgacaaatatgggatacta
attaaagtcaaattcagggagacggggcaactccaagttctaagtgcccaccaccaatct
ggaggagaacgatctgtttcaactattctttacctagtttctttgcaagacctaacaaat
tgcccctttagagtggtggatgaaataaatcaaggaatggatcctatcaatgagaggaaa
atgtttcagcaattagtgagagctgccagccaacccaatacaccacagtgcttcttgctt
actccaaagttgctgccaaatcttgaatacagtgaagcatgcagcattctgactgtaatg
aatgggccctggattgagcagccatccaaagtgtggagtggtggagaaagctggaggtct
gtgatgggattagcctctgttgccgctgactag
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