Laccaria bicolor: LACBIDRAFT_151181
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Entry
LACBIDRAFT_151181 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lbc
Laccaria bicolor
Pathway
lbc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LACBIDRAFT_151181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbc03041
]
LACBIDRAFT_151181
Enzymes [BR:
lbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LACBIDRAFT_151181
Spliceosome [BR:
lbc03041
]
Complex A
U2 snRNP components
U2 related factors
LACBIDRAFT_151181
Complex B
LACBIDRAFT_151181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
CMS1
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
6072827
NCBI-ProteinID:
XP_001876757
JGI:
151181
UniProt:
B0CYQ5
LinkDB
All DBs
AA seq
661 aa
AA seq
DB search
DELDATDLNPEDILALAAKKAKKKELAAVDHGRVRYEPFRKEFYIPPPDIAAMTEEEAEF
LRLELDSIKIRGIDCPKPVTKWSHFGLPANCLDVIKRLNYTAPTSIQAQAIPAIMSGRDV
IGVAKTGSGKTIAFLLPLFRHIKDQRSLEQMEGPIAVVMTPTRELAVQIHKECKAFLKVL
NLRAVCAYGGSPIKDQIAELKKGAEIIVCTPGRMIDLLTANSGRVTNLKRVTYVVLDEAD
RMFDMGFEPQVMKIINNIRPDRQTVLFSATFPKQMDSLARKILHKPLEITVGGRSVVAAE
IEQIVEVRPEDTKFNRLLEILGQMYNEDPECRTLVFVDRQEAADNLLRELMRKGYLCMSL
HGGKDQVDRDSTIADFKSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGR
TGRAGNKGTCVTFITPEQERYSVDIYRAVKASNATIPKDLEELANGFLDKLKTGKAQAAG
SGFGGKGLDRLDKERDAREKAERKAYGEPGEEDKPTPAEEMAAKATASSGDDMTFGNFKV
EIKRGPAPDSSKANPDSTDFHAIIPINDYPQKARWRVTNKETMVQLIDMTGASVTNKGIY
YDHGKEPPLEGPPKLHLLVESNEEYRVEQAVREIKRLLIEASAAALQAEMRNPTATGRYS
V
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gacgagcttgacgccaccgatctcaatcctgaagatattctcgcgctagcagccaagaag
gccaaaaaaaaggaacttgcagcggtcgaccacggacgagtacgttatgaaccttttcga
aaggagttctatatccctcctcccgatattgcggcgatgacagaggaagaagctgagttc
cttaggcttgaacttgatagtatcaaaattcgtggcattgattgtccaaaacccgtcaca
aaatggagtcacttcgggttaccagcgaactgtctagatgtcattaagcgactgaactac
acggctcccacttccatacaagcacaggcgattcccgcaataatgtctgggcgagatgtt
attggcgttgccaagactgggtcagggaagaccatcgcattcttactgcctctttttcgt
catatcaaagatcagcgctctcttgaacagatggagggtccaattgctgtggtgatgact
ccaactcgtgaacttgctgttcaaattcataaggagtgtaaggcatttctaaaagtgttg
aatctacgcgctgtctgtgcgtatgggggctcgcctatcaaggaccagattgcagaactc
aaaaaaggagctgaaatcattgtctgtactccagggcgtatgatcgatctgctaaccgcc
aactcaggtcgtgtcacaaatctcaaacgagtaacctacgtcgttcttgacgaagctgac
cggatgtttgatatgggttttgaaccccaggtcatgaaaatcatcaataacattcgacca
gatcgacaaaccgtcctgttctcagctacatttcccaaacagatggattctctggctcga
aaaattcttcataaaccgttagaaatcactgtcggcggtcgatctgtcgtggctgcagag
attgaacagattgtcgaagtacgcccagaagataccaagttcaatcgccttcttgaaatt
ctcggtcaaatgtacaatgaagacccggaatgccgtaccctagtcttcgttgatcgccag
gaagccgctgacaatctccttcgtgaactcatgcgaaaagggtatctttgtatgtcccta
cacggtggtaaagatcaggttgatcgggactccaccatcgccgattttaaatctggagtt
gtacctatcgtgatcgccacctccgtcgctgcgcggggtttggatgtgaagcaattaaag
ctggtcatcaactatgacgcgcctaatcatatggaagattatgttcatcgtgctggacgg
acaggacgtgctggtaataagggaacctgcgtgactttcataacacccgagcaggaaaga
tattcggtggatatctatcgggcagtcaaagccagcaacgccaccatacccaaggatttg
gaggaacttgcaaatggctttttggacaagttgaagacaggcaaggctcaagcggctggg
tctggctttggtggcaaaggcctcgatagattagacaaggaacgtgacgctcgagagaag
gccgaacgtaaggcgtatggagagccaggagaggaggataaacctacgccagccgaagag
atggctgccaaagcgacagcatccagtggtgatgatatgactttcggaaatttcaaggtt
gaaatcaaacgcggtccagcgccagattcttcgaaagcaaatcctgactcgacagatttc
catgccatcatacccatcaatgattaccctcaaaaggctcgttggcgtgtcacgaataag
gagactatggtccagctcatcgacatgaccggcgcgtcagttactaacaagggtatctat
tacgatcatggcaaagagcctcctttggaagggccacccaagctccatctcctcgtggag
tcgaacgaggaatatcgcgtcgagcaagctgttagggagattaagcgtttgctgatcgag
gcatctgctgctgccttgcaggcagaaatgcgcaatccaacagcaactgggagatacagt
gtt
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