Laccaria bicolor: LACBIDRAFT_316459
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Entry
LACBIDRAFT_316459 CDS
T01044
Symbol
HDA16207
Name
(RefSeq) histone deacetylase complex protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbc01009
]
LACBIDRAFT_316459 (HDA16207)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_316459 (HDA16207)
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_316459 (HDA16207)
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_316459 (HDA16207)
Enzymes [BR:
lbc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
LACBIDRAFT_316459 (HDA16207)
Protein phosphatases and associated proteins [BR:
lbc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
LACBIDRAFT_316459 (HDA16207)
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
LACBIDRAFT_316459 (HDA16207)
Membrane trafficking [BR:
lbc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LACBIDRAFT_316459 (HDA16207)
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
LACBIDRAFT_316459 (HDA16207)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
6085476
NCBI-ProteinID:
XP_001889846
JGI:
316459
UniProt:
B0E106
LinkDB
All DBs
AA seq
705 aa
AA seq
DB search
MEAYEAGPSEAMDVDQQPAQTNGEFPAPVQRGPRALSVPMKHPGLTVGFVYSTEMMAHFS
PQGHPERPARIDRIWNTLQNDQLTQNMKWLPIRPVRKEEALLVHSDDHWDKVIAIQYMSD
QQLADSEEYYEQMSLYVMSGTTRAALLSCGGVIESCLAVARGELKKTFAIVRPPGHHAEP
DEHMGFCFFNNVAVAARVVQQLTKIKKIMILDWDVHHGNGTQRAFNEDNSVLYVSIHRYE
QGTYYPCGPFGGMQSCGEGPGLGFSVNVPWPEAGMGDADYLHAFQKVVMPIAMEFAPELV
ISKCHFFCFNVAIAKPPTVYIVSAGFDAAAGDDLGECFVSPAGYAHMTHMLSGLAGGRLV
VALEGGYNLDSISNSALAVARILMGQAPDELPPLVASEAATETVWLVAREQSKYWKSVDP
KSCEPQEGLEDITFSIPEILKAHRQHYLYTQYDMMQVPLISAELEQRFSSQIMCTSDIFE
NKTLIVFVHEFGNLRLELASSATCDVHLERSHLIDFSKKLVTWVKKEGYALLDANLYPKP
SQAPVTRGNKNPQDIGRDIITYLWDNYIQLSSATRVVFIGHGPGCQPLVELVDRRALSVI
KSVKAFVQIVGPQIQPTAPQPSSDEIRAWYKKHSLVILPENHPFIGPSAKSFNLKRHGTL
VPIQESQQVKMVIQALPGVQEFVRENLQRYPLSDTTHTNNLARPY
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctatgaagcaggtccttcggaagcaatggatgtggaccagcaacccgcccaa
actaacggagaatttcctgcaccggtccagcgtggacctcgtgcattatcggtccccatg
aagcaccccggccttaccgtcggctttgtatactctacagaaatgatggcccatttctct
ccacaaggtcatccagaacggccagctcgcatagatcggatatggaatacattacaaaac
gaccaacttactcaaaatatgaagtggttgccaatccggcccgttcgtaaagaggaagct
ttacttgtacatagcgacgatcattgggacaaagttatcgcaattcaatacatgtccgat
cagcaactcgccgattctgaggaatactatgaacaaatgtcattgtatgttatgtctgga
accactcgcgctgctctattaagctgtggtggggtgattgaatcatgtttggctgtcgcc
agaggtgaattaaagaagacatttgctatcgtacggccaccaggccaccatgctgaaccc
gatgagcatatgggcttctgtttctttaacaacgtcgctgtagccgctagagtcgtgcaa
cagctaacgaagataaagaaaattatgattctcgactgggatgttcatcacggcaatggt
actcaaagggcattcaacgaagataacagcgttctctacgtttcaatacatcggtatgag
caaggtacttactacccatgtggtcctttcggtggaatgcagtcgtgcggcgagggcccc
ggcctcgggttctcagtcaacgtaccatggcctgaagcgggcatgggagacgccgactac
cttcatgcctttcagaaagttgttatgccgattgcgatggagtttgctcctgaactggtg
ataagcaagtgtcatttcttttgcttcaacgtcgcgatcgctaaaccgcccactgtatat
atagtctctgcaggcttcgacgcagctgctggcgacgaccttggagagtgcttcgtttct
cctgcggggtacgcacatatgacgcatatgctgtctggattggctggcggtcggttagtt
gtcgccttggagggtggatacaacttggactcaatatcgaattctgccttagctgttgca
agaattctgatggggcaagctcccgacgagcttccgcctctcgttgcatctgaagccgca
acggaaaccgtttggctagtcgccagggagcagagcaagtattggaagagcgttgatcca
aaatcatgcgagcctcaggaaggcctagaagacataaccttctcgataccagaaatcctc
aaagcacacaggcaacactacctatatacccagtatgacatgatgcaagtccctttgatt
agtgcggaactcgagcagcgcttctcttcacaaatcatgtgcacgtcagatatattcgaa
aacaaaacactaatagtctttgttcacgaatttggtaatctgcgactagaattagcgtca
tccgccacttgcgatgtccacctagagcgctcccacttgattgatttctcaaaaaagctt
gtgacatgggtgaaaaaagagggttatgcgttgcttgacgcaaacttatatccaaaaccg
agccaagcgcctgtcacaagaggaaataaaaatccgcaagacatcgggagagatatcatt
acatatttatgggacaattacattcagctttccagcgcgactcgggtggtatttattggt
cacggtcctggttgtcaacctttggttgaactcgttgaccgacgggctctatctgttatt
aagtcggtgaaggcatttgttcaaatcgtcggaccccaaatacaacctacggcacctcaa
ccgtcatctgatgagatccgcgcttggtataaaaagcactctcttgtgattttgccagag
aatcaccccttcattggcccctccgccaagtcattcaacttaaaacgacacgggactttg
gttccgatacaggagtcccagcaagtcaagatggtcatccaagccctccccggagtccag
gagtttgtaagggaaaacttgcagcggtacccattatccgacacgacacatacgaataat
ctcgccaggccttactag
DBGET
integrated database retrieval system
