Bombilactobacillus bombi: DS830_01190
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Entry
DS830_01190 CDS
T06522
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lbm
Bombilactobacillus bombi
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbm03019
]
DS830_01190
03009 Ribosome biogenesis [BR:
lbm03009
]
DS830_01190
Enzymes [BR:
lbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DS830_01190
Messenger RNA biogenesis [BR:
lbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DS830_01190
Ribosome biogenesis [BR:
lbm03009
]
Prokaryotic type
rRNA helicases
DS830_01190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DUF2608
Helicase_RecD
AAA_30
Mob_Pre
Motif
Other DBs
NCBI-ProteinID:
AXX64204
UniProt:
A0A347SQ95
LinkDB
All DBs
Position
232563..233912
Genome browser
AA seq
449 aa
AA seq
DB search
MATFAEYHWPNFINSALTKINFQHPTPVQEQVIPIIMAGRDVITQAQTGSGKTHAYLLPL
LSQITSDLQVQLVITAPSRELAYQIRTAAETIIQQAPQTLHIGFYVGGTDKQKQIKHLQQ
WQPQIVIGTPGRIWDLINNHVLQVQTVKYFVIDEADMTLDMGFLPSVDKIASSMPQKLQT
LVFSATIPQKLQPFLKKYLHQPVIERLEVPTIIAPNIDNWALFTKGRDKNAVLYQLLTLG
QPYLALIFANTIKAVDQIYDYLAAQGLKVAKIHGDLTPRERKRTMKAVEQMEYQYVVASD
LAARGIDIPGVSHVINVEIPNEDEFFVHRVGRTGRNQMSGIAITLYGPDEEDKIAHLEQL
GIKFSYKEIKNKEIATAKPHDRRKQRTAHNQTLDPTLKGLVKKEKRKKKPGYRKKIKQAI
QNDRQQKRKLEQRSERQRLRKLKKQQNKI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatttgccgagtatcattggccgaattttattaattcggcattaactaaaatc
aactttcaacatcccacacctgtgcaagaacaggttataccaataattatggccggtcga
gatgtgattacgcaagcacaaactggtagtggtaaaacgcatgcttatttactaccgtta
cttagtcagataacgtctgatttgcaggtacaattggtaatcactgcgcctagtcgagag
ttggcctatcaaattcggactgcagctgaaactattatccaacaagcaccccaaacttta
cacattggtttttatgtgggcggcaccgataaacaaaaacaaataaaacatttgcaacaa
tggcaaccacaaattgttattggcacaccaggtagaatttgggatttaatcaataatcat
gttctacaagttcaaacggttaaatattttgtgattgatgaagcagatatgacattagat
atgggatttttgcccagcgttgataagattgccagcagcatgccccaaaaattacaaacg
ctagttttttcggctacaattccccaaaaattacaaccatttttgaaaaaatatttacat
caaccagttattgaaagactggaagtaccaacaataattgcacctaatatcgataattgg
gcactatttactaaaggccgcgataagaatgcagttttatatcaacttctcacattggga
cagccttatttagccttaatatttgccaatacaataaaagcggttgatcaaatttatgat
tatttagcagctcaaggcttaaaagtagcgaaaatccatggcgatttaactccgcgagaa
cgaaaaagaacaatgaaagctgttgaacaaatggaatatcaatatgtagttgcttctgat
ttagcagctagagggattgatattcctggtgtttcccatgttattaatgttgaaatacct
aatgaagacgagttttttgttcatcgtgtaggtcgaacaggtcgtaatcaaatgagcggg
attgccattactttatatggtcctgatgaagaagacaaaattgcgcatttagaacaacta
ggtattaaatttagttataaagaaattaaaaataaagaaatcgcaacagctaagccgcat
gatcgccgtaaacagcggactgcacataatcaaacattagatcctactttaaagggatta
gttaagaaagaaaagcgcaagaaaaagccgggttatcgtaaaaaaattaagcaggcaatt
caaaatgatcgccaacaaaaacgaaaattggagcaacgttcagaacgccaacgcttgcgt
aagctgaaaaaacaacaaaataagatttaa
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