Lonsdalea britannica: CKQ53_04375
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Entry
CKQ53_04375 CDS
T05623
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lbq
Lonsdalea britannica
Pathway
lbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKQ53_04375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbq03400
]
CKQ53_04375
Enzymes [BR:
lbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKQ53_04375
DNA repair and recombination proteins [BR:
lbq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKQ53_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
TrwB_AAD_bind
AAA_30
zinc-ribbons_6
AAA_19
zinc_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
AXW86288
LinkDB
All DBs
Position
929628..931826
Genome browser
AA seq
732 aa
AA seq
DB search
MPVVQVALPVPLARTFDYLLPPGSLPPTPGMRVRVPFGNRRMIGIVTALSDNSALPLTQL
KPVQDVLDQESLFPASLWRILMWAVEYYHYPIGEVLFHALPTLLRQGKPAHTAPLWQWFA
TEQGRETPLPTLKRAPKQQQALAALLQGPLYRHQVSDAQLTEAALQALRAKGLCDLRPLS
QAPRDWRPDFSVSGERLRLNTEQATAVGAIRSEDQHFSAWLLAGITGSGKTEVYLSVLEN
ILAQGKQALVLVPEIGLTPQTIARFRDRFNAPVDALHSGLNDSERLSVWLRAKNGEAAIV
IGTRSALFTPFARLGLIVIDEEHDSSYKQQEGWRYNARDLAVFRAREENIPIVMGSATPA
LETLYNVQIGKYRQLRLSKRAGNARLAQQNILDLKGLPLNTGLSQPLIARIRHHVREGNQ
VILFLNRRGFAPVVMCHECGWIAECPRCDHYYTLHQHQQMLRCHHCDSQRPVPQQCPDCG
STNMMPVGLGTEQLEQALPALFPDTPITRIDRDTTSRKGALEQQLAQVRQGGARILIGTQ
MLAKGHHFPDVTLVALLDVDSSLFSADFRAAERFAQLYTQVSGRAGRAGKAGEVVLQTHH
PEHPLLQTLLQQGYDAFAAQTLKERQSVALPPFTNHVLFRADDHDNQQASQFLHQLRNLL
EASPLRDENLWVLGPVPALQPKRAGRFRWQLLLQHPSRARLQHLLRTSLSLVDTLPQSRK
VKWVLDVDPTDG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgttcaggttgccctgcccgtgccactggcgcgtacatttgattatctgctg
cccccgggatctctgcccccgacgcccggcatgcgggtacgcgtgccgtttggcaaccgc
aggatgattggcatcgtgaccgctctcagcgataacagcgcgctgccgctgacccagctc
aaacccgtgcaggacgtactggaccaggaatcgttattcccagccagcctgtggcgcatc
ctgatgtgggccgtcgagtactaccactaccccatcggcgaagtgctgttccatgcgttg
ccgacgctactgcgtcagggtaaacccgctcacacggcgccgctgtggcagtggttcgcc
accgaacaagggcgtgaaactccgttgccgacgctgaaacgcgcgcccaaacagcaacaa
gcgctggccgcgttactgcaagggccgctctaccgccatcaggtcagcgacgcccaactg
accgaagccgctctgcaagcgttacgcgctaaagggctatgcgacctgaggcccctatcg
caagcgccgcgagactggcgaccggacttcagcgtcagcggcgaacgcctgcgtctgaat
accgaacaggcgaccgccgtcggcgcgatacgcagcgaagatcagcatttttccgcctgg
ctgctggccgggattaccggctccggcaagaccgaggtgtatctcagcgtgttggaaaac
atcctggcgcagggaaagcaggcgctggtgctggtgccggaaatcggactgacaccgcaa
accatagctcgcttcagagatcgctttaacgcgccggtagacgcgctgcactccggtttg
aacgacagcgaacgtctgtctgtatggctgcgggcgaaaaacggggaagccgccatcgtg
atcggcacccgctccgccctgttcacgcctttcgcccggctgggcctcatcgtcatcgac
gaagagcacgacagctcgtataaacagcaggaggggtggcgctacaacgcccgcgatttg
gccgtgttccgcgcccgggaagagaatatccctatcgtcatgggctccgcgaccccggcg
ctggaaacgctgtataacgtccaaatcggcaaataccggcagttacgcctcagtaaacgc
gctggtaatgcgcggcttgcccagcaaaatatcctcgacctgaagggactgccgcttaac
accggtctatcgcaacccctgattgcacggatacgtcaccacgttcgggaaggaaaccag
gtcatcctgtttctcaatcgccgcggctttgcgccggtggtgatgtgtcatgaatgcggc
tggatcgccgagtgtccgcgctgcgatcactattacacactgcatcagcaccagcagatg
ctgcgttgccatcactgcgacagccaacgaccggtgccacaacaatgtcctgactgcggc
tcaaccaacatgatgccggtgggactggggaccgagcagctcgaacaggcgctgcccgcc
ctctttcccgatacgccgattactcgcatcgatcgcgacaccaccagccgcaaaggcgcg
ctggagcaacagctggcgcaggtgcgtcagggcggcgcccggatcctgatagggacgcag
atgttggccaaaggccaccacttccctgatgtgacgctggtggctctgctggacgtcgac
agctctctgttttccgccgacttccgggccgcggaacgattcgcccagctttacacccag
gtctctggccgcgccggacgcgccggaaaagccggcgaggtggtgttgcaaacccatcac
cccgaacatccgctgctgcaaacgttgttgcagcagggctacgatgccttcgccgcccaa
acgctgaaagagcgccaaagcgtggctctgccgccgttcaccaaccacgttctgtttcgc
gctgacgatcacgacaatcagcaggccagccaattccttcaccagctacgtaatctgctg
gaagccagcccgctgcgcgacgaaaacctctgggtcctgggaccagtgcccgcgctacag
cccaaacgcgcgggacgatttcgctggcagctgctgcttcagcacccctcccgcgcccga
ctacagcatctgctgcggacgtccctgagcctcgtcgataccctgccgcagtcgcgcaag
gtcaaatgggtgctggacgtcgacccgacggacgggtga
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