Lonsdalea britannica: CKQ53_09810
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Entry
CKQ53_09810 CDS
T05623
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
lbq
Lonsdalea britannica
Pathway
lbq01501
beta-Lactam resistance
lbq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CKQ53_09810
01503 Cationic antimicrobial peptide (CAMP) resistance
CKQ53_09810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbq02000
]
CKQ53_09810
01504 Antimicrobial resistance genes [BR:
lbq01504
]
CKQ53_09810
Transporters [BR:
lbq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKQ53_09810
Antimicrobial resistance genes [BR:
lbq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CKQ53_09810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AXW87249
UniProt:
A0AAD0SHG2
LinkDB
All DBs
Position
complement(2150828..2153974)
Genome browser
AA seq
1048 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIMVMLTGLLAITQLPVAQYPSIAPPSVEVTASYPGADAKTVQDT
VTQVIEQNMSGIDNLLYMSSNSDSSGNAQITLTFDSKANPDIAQVQVQNKLQLAMPLLPQ
EVQQQGVSVQKSSSSFLMVVGFISDDKNTTQQDIADYVGSSVKDPISRVTGVGDTQLFGA
QYAMRIWLDPNKLTNYQMTTSDVVSAITVQNTQIAAGQLGGTPPVPGQKLNSSIIAQTRL
NNTEQFGNILIRVNQDGSQVRLKDVARIELGGEDYSVVARYNGQPASGLGIKLATGANAL
DTANAVKAELAKLQAQFPAGLKVVYPYDTTPFVKISINEVVKTLIEAIVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLSPKEATRKSMGQIQGALVGIALVLSAVFVPMAFSGGSTGAIYRQFSVTIVSSMVL
SVLVALILTPALCATLLKPIDNHDHGKTKGFFGWFNRLFEKSTHHYTDSVANILRSTGRY
VVIYLLLVIGLGLMFMRLPSSFLPQEDQGVLLTMVQLPVGSTQESTQKVLDKVDDYYLNN
EKDNVNSVFTVNGFGFAGRGQNMGIAFASLKDWDERSGAENKVDAIAGRAYAAFSQIKEG
LVIPFNIPAIVELGTASGFDFQLVDQGNLGHDKLMQARNQLLGMVAQHSDTLVSVRPNGM
EDTPQYRLDIDQEKALALGVTLDEINSTLATALGGSYVNDFIDRGRVKKVYVQADAKFRM
LPGDIQNWYVRGTAGQMVPFSAFGSAHWEYGSPRLERYNGLPSMEILGEAAPGKSTGEAM
ALMEQLASQLPEGINFDWTGMSYQERLAGNQAPALIVISAIVVFLCLAALYESWSIPFSV
MLVVPLGILGAVVAASMRGLENDVYFKVGMLTTIGLSAKNAILIVEFAKDLMEKEGKGLV
EATLDAVRMRLRPILMTSLAFILGVVPLVISSGAGSGAQNAVGTGVMGGMLTATILAIYF
VPVFYVVVSRRFSKKKAAENTEHQPDQH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttttttatagatcgccccatcttcgcatgggtcattgccattatggtgatg
ctgaccgggctattggcgataacgcagttgccggtagcccagtatccgagcattgcgccg
ccgtccgttgaagtgaccgcctcttatccgggtgcagacgccaaaacggttcaggatacg
gtaacgcaggtcatcgaacagaacatgagcggcatcgataatctgctgtacatgtcttcg
aacagcgactcatcgggtaacgcccagatcacattaacctttgactccaaagctaacccg
gacatcgcgcaggtacaggtgcagaacaaactgcagctcgccatgccactgttgccgcag
gaagttcagcagcaaggcgtcagcgtacagaagtccagcagcagctttctgatggtggtt
ggttttatcagcgatgataaaaacacaacccaacaagatattgcggattacgtcggctcc
agcgtcaaagaccccatcagccgcgtcactggcgtgggtgatactcagctgtttggtgcc
cagtacgccatgcgtatctggcttgaccctaacaaactgaccaattaccagatgaccacg
tcagacgtggtttcggcgattacggttcagaatacgcagattgccgccggtcagctaggt
gggacgccgccagtgccggggcaaaaactcaactcgtcaattatcgctcagacaagactc
aacaataccgagcagttcggcaacatcttgatccgcgtgaatcaagacggttcgcaggtt
cgactgaaagacgtcgccagaatcgaactgggcggtgaagactacagcgtcgtggctcgt
tataacggccagccggcctccggtctcggtatcaaactggcgaccggcgccaacgcgctg
gataccgctaacgcggttaaagccgagttggcaaaactgcaggcgcagttccctgcgggg
ttgaaagtggtctatccgtacgacactacgccgttcgttaagatttctattaacgaagta
gtgaaaacgctgattgaagctatcgtgctggtgttcctggtcatgtatctgttcctgcag
aacttccgcgcgacgctgatcccgaccattgcggttccggtggtactgctgggaacgttt
gccatcctctcggcattcggttactccatcaacacgttgaccatgttcgcgatggtcttg
gctatcggtcttctggtggatgacgccatcgtcgtcgtggaaaacgtcgaacgtgtcatg
gcggaagaaggtctatcgccgaaagaagcaacgcggaaatccatgggccagattcagggc
gcgctggtcgggattgctcttgtgctgtccgccgtgtttgttccgatggcgttctctggc
ggctcaaccggcgcaatctaccgtcagttctccgtcaccattgtatcgtctatggtgctg
tccgtactggtggcattgatcctgacccctgccctgtgcgccacgctgcttaaacccatt
gataatcatgaccacggcaaaaccaagggcttcttcggctggttcaaccgcctgtttgag
aagagcacgcatcactacaccgacagcgtcgccaatattctgcgcagcaccggtcgctat
gtggtgatttacctgcttctggtcattggtctgggcctgatgttcatgcgtctgcccagt
tcgttcctgcctcaggaagaccagggcgtgctgctcaccatggtgcagttgccggtcggc
tccacgcaggaaagcacacagaaagtgctggataaggtggatgattactacctgaataat
gaaaaggacaacgttaactccgtctttaccgtcaacggcttcggattcgccggacgcgga
caaaacatggggatcgccttcgccagcctgaaagactgggatgagcgtagcggagcggaa
aataaggtcgatgctatcgctggccgtgcttacgccgccttttctcagataaaagaaggg
ttggttattccgtttaacatccctgccatcgttgaactgggtaccgcaagcggcttcgac
ttccaattggttgaccagggtaacctgggccatgacaagctgatgcaggcccgtaaccag
ctgttggggatggtcgcacagcattcggatacgttggtgagcgtacgtccgaacggcatg
gaagatacgccgcaatatcgtctggatatcgaccaggagaaagcgctggcgctgggcgtt
acgttggatgagatcaactcgacgctggcaaccgcgttgggcggaagctacgtcaacgac
ttcattgaccgcggtagggtgaaaaaagtctacgttcaggcagatgcgaagttccgcatg
ctacccggcgatattcagaactggtatgtgcgcggcactgcgggacagatggttccgttc
tccgccttcggttcggcccactgggaatatggctccccacgtttggaacgctataacggt
ttaccctccatggaaattctgggtgaagccgcccctgggaaaagtaccggtgaagcaatg
gcgttgatggaacaattggcgtcgcagttgcctgaagggatcaacttcgactggacgggg
atgtcttatcaggaacgtcttgcaggaaaccaggcgcccgcgctgattgtcatttctgct
atcgtcgtcttcctgtgtcttgccgctctatacgagagctggtcaatccccttctccgtc
atgctcgtcgtgccactggggattctgggggcggtcgtcgctgccagtatgcgcgggttg
gaaaacgacgtgtactttaaggtggggatgctcacaaccattgggctatcagccaaaaac
gccatcttgatcgtcgagtttgcgaaagacctgatggaaaaagaagggaaaggattggta
gaagcaacgctcgatgctgtcaggatgcgtttgcgtcccatccttatgacctcactggcc
tttattctgggcgtcgtgccgctggtgatcagctctggcgcaggctccggcgcgcagaat
gcagtcggtacgggcgtcatgggcgggatgctgaccgccaccattttggccatctacttc
gtgcccgtcttttacgtcgtcgtcagccgacgctttagtaaaaagaaggccgctgagaat
acggaacatcagccagaccagcactga
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