Lonsdalea britannica: CKQ53_15675
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Entry
CKQ53_15675 CDS
T05623
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
lbq
Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbq03400
]
CKQ53_15675
DNA repair and recombination proteins [BR:
lbq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CKQ53_15675
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zinc_ribbon_2
zf-tcix
AAA_22
AAA_16
AAA
MciZ
SLFN-g3_helicase
QslA
UPF0547
Motif
Other DBs
NCBI-ProteinID:
AXW88272
UniProt:
A0AAD0SI39
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Position
3433814..3435574
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AA seq
586 aa
AA seq
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MSFTLRPYQREAVDATLNYFRHHASHAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVEQNHAKYRALGLEADIFSAGLGQRQSQGKVVFGSVQSVARHMTHFDQAFSLLIVDECH
RIGDADDSQYRQILRHLQSVNPRLRLLGLTATPYRLGKGWIYQYHYHGMVRGDETCLFRD
CIYELPLRYMIKHGFLVPPDRLDMPVIQYDFSKLKVQSHGLFSEADLNRELKRQKRVTPQ
IIRQVQDYGADRKGVMIFAATVEHATEITRLLPEGEAALISGETPPGDRDALIAAFKQQK
LRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNP
FDLFTPEVGASKSHADSQPVQVFCPQCGFANLFWGKCTEDGTVIEHFGRRCQGFTEEDDG
RREQCDYRFRFKSCPHCGAENDIAARRCHQCDAILVDPDDMLKAALKLRDALVLRCSGMS
LTPGADNQGDWLRVTYHDEDGAEVNERFRLHTPAQRKAFEYVFLRVHQRAPGVPFAWKTS
ADILQQQERLRAPDFVVARQQGKFWQIREKLFDYQGRYRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttacgctacgtccctaccagcgcgaggccgttgacgccacgctaaactatttt
cgtcatcacgcctcgcacgccgtgatcgttcttcctaccggcgcgggcaaaagtctggtg
attgccgagctggcgcgactggcgcgcggacgcgtgctggtcctggcgcacgtcaaagag
ctggtcgagcaaaaccacgcaaagtatcgggcgctgggactggaagccgatatcttttcc
gccggactgggacaacgtcaaagtcagggcaaagtggtctttggcagcgttcaatccgtc
gctcgccatatgacgcacttcgatcaggctttttcattgctgattgtcgatgagtgtcac
cggatcggagacgcggatgacagccaataccgtcagattctgcgccatctgcagagcgtc
aatccccggctgcgactactgggcctgaccgcgacgccttatcggctcggcaaggggtgg
atctatcaataccactatcatgggatggtgcgaggagacgaaacctgtctgtttcgcgac
tgtatctatgagctgccgctgcgttacatgattaaacacggttttctggtgccgccggac
cgtctggatatgccggtgattcagtacgacttcagcaaactgaaagtacagagtcacggg
ctgttcagcgaagccgacctgaaccgggaactgaagcgtcagaaacgcgtcacgccgcaa
attatccgtcaggttcaggactacggagctgaccggaaaggcgtgatgatcttcgccgcc
acggtggaacacgccactgaaatcacccgcctgctgccggagggcgaagcggcgctcatc
agcggtgaaacgccgcccggagatcgcgatgccctgattgcggcgttcaaacaacagaag
ctgcgctatctggtcaacgtttccgtgctgacgaccggctttgacgcgccgcatgtcgat
ctgatcgctatcttgcgccccaccgaatctgtcagcctgtatcagcaaattgtcgggcgc
ggtttgcgtctctctccgggcaaaaccgactgtctgattttggactacgcgggcaatccc
ttcgacctcttcacgccggaagtcggcgcgagcaagtcgcacgcggacagccagccggtg
caggtgttctgcccacagtgcggctttgccaatctgttttggggaaaatgtacggaagac
ggcacggtcatcgaacatttcggccgccgctgtcaggggtttaccgaagaggatgacggc
cgacgcgagcagtgcgattaccgtttccgctttaaaagctgcccgcactgcggcgccgaa
aacgacattgccgcccgtcgctgccatcagtgcgacgccatactggtcgatcctgacgat
atgctcaaagccgcgctgaaactccgtgacgccctcgtgctgcgttgcagcggcatgagc
ctgacgccgggagcggataatcaaggcgactggctgcgcgtcacctatcacgatgaggac
ggcgcagaggtcaatgagcgctttcggctgcacacgcccgcgcaacgaaaggcctttgag
tatgtgttccttcgcgttcatcaacgcgcgcccggcgtcccattcgcttggaaaaccagc
gccgacattctgcaacaacaggagcgcctgcgcgcgcccgacttcgtcgtcgcacgccag
cagggaaaattctggcaaattcgtgaaaaactgttcgattatcaaggccgctaccgacgc
gccaatgagctacgcggctga
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