Lachnospiraceae bacterium KM106-2: lbkm_1573
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Entry
lbkm_1573 CDS
T08927
Name
(GenBank) 3'-to-5' oligoribonuclease A, Bacillus type
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx00920
Sulfur metabolism
lbx01100
Metabolic pathways
lbx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
lbkm_1573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbx03400
]
lbkm_1573
Enzymes [BR:
lbx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
lbkm_1573
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
lbkm_1573
DNA repair and recombination proteins [BR:
lbx03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
lbkm_1573
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BBF42888
UniProt:
A0A7U6KFB6
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All DBs
Position
complement(1643391..1644356)
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AA seq
321 aa
AA seq
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MNDILKKISGAKRIAIAGHVRPDGDCIGSCMAMYNYILNNYHIGIVNVFLEFVPEKFSYI
DHVEDVITDYSCEADYDLFISLDCGDTERLGQAYKYFEAAKDTINIDHHISNTKFAAINH
VEPESSSTCETLYGLLDEKKLDLSVATALYTGIVHDTGVFKHSNTGKRTMEIAGSLLEYG
VNNSAIIDESFYQKTYLQNQLLGRCLIESMLVLDGKCIVSVIRKEMLDFYGATSKDTDGI
IDQLRVTSGVEVAMLVIENDYQVYKVSMRSNDLVDVSKIAVYFGGGGHIKAAGCTICGTA
HDVMNNILKLVDAQLREHHGC
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatattttaaaaaagatatcaggtgcaaaaagaatagcaatcgcaggacatgta
agaccggatggagattgtatcgggtcttgcatggctatgtataactacattttaaacaat
tatcatattggtatagtgaatgtttttctggaattcgttccagaaaaattttcatatata
gaccatgttgaagatgtgattacggattattcctgcgaggcagactatgatctatttatt
tcgcttgattgtggagacacagaacgattaggacaagcatataagtattttgaagcagcg
aaagatacgatcaacatcgatcatcatatcagcaatacaaaatttgctgcaatcaatcat
gtagaacctgagtcaagttcaacttgcgaaactctttatgggcttttagatgagaagaag
ttagacttaagtgttgctactgcattgtataccggaattgtacatgatacaggagtattc
aaacattccaatactggaaagagaaccatggagatcgccggatcactattagaatatggt
gttaacaatagcgcgatcatcgatgagtctttttatcagaaaacatatctacagaatcaa
cttcttggacgttgtctaatcgaaagcatgttagttcttgatggtaagtgcattgtatcg
gttattcgtaaagaaatgcttgatttttatggagcgacgagtaaagatactgatgggatc
atcgaccagcttcgagtaacaagcggagtagaagtggcaatgttagttatagaaaatgat
tatcaagtctataaggtaagtatgcgttcgaatgatcttgtagatgttagtaagattgct
gtttactttggaggcggcggtcatatcaaagcggcaggctgcacaatctgtggaactgct
catgatgtgatgaataatattttaaaattagtagatgcacagcttagggagcatcatgga
tgctaa
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