Leadbetterella byssophila: Lbys_3209
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Entry
Lbys_3209 CDS
T01350
Name
(GenBank) glycine dehydrogenase (decarboxylating) beta subunit; glycine dehydrogenase (decarboxylating) alpha subunit
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
lby
Leadbetterella byssophila
Pathway
lby00260
Glycine, serine and threonine metabolism
lby00630
Glyoxylate and dicarboxylate metabolism
lby00785
Lipoic acid metabolism
lby01100
Metabolic pathways
lby01110
Biosynthesis of secondary metabolites
lby01200
Carbon metabolism
Module
lby_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Lbys_3209
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Lbys_3209
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Lbys_3209
Enzymes [BR:
lby01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Lbys_3209
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Pyridoxal_deC
GCIP_C
Motif
Other DBs
NCBI-ProteinID:
ADQ18870
UniProt:
E4RVW0
LinkDB
All DBs
Position
complement(3610608..3613478)
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AA seq
956 aa
AA seq
DB search
MLIDLNSSELFQDRHQGKSESEISAMCASIGVNSLEELIDQTIPSNIRSEKALNLPAGLS
ETEFLEKITTLADKNKVFRSFIGCGYYDTVLPKVVQRNILENPAWYTAYTPYQAEIAQGR
LEMLLTFQTVVSDLTGMEIANASLLDEGTAAGEAMSMLAGLRKGTKKNAQTFFVAENVHP
QVLDVVRGRAKGIGINIEIGNPETFDFSTSDVYGVLLQNPGTCGEVKDYTDLIAALHEQD
IKVCLNTDLLALTLIKSPAEMGADVAVGTSQRLGVPMMYGGPHAAFFATKEEYKRQIPGR
IIGVSVDASGNRALRMALQTREQHIRREKATSNICTAQVLLSVLSAAYCLYHGPEGLKRI
ASKVHGLTTLFANSVQGLDYRVVNDTYFDTVTLEVQDNTKIRQIAEAKEVNLRYHGTENI
SISFDETKTLADVALLLEILAEAKGTKVVAQLKKEVESNLPSALLRTTPYLQHPIFSSYR
TEHEMLRYLKSLENKDLSLVHSMISLGSCTMKLNATAEMMPITLPGFAQIHPFAPLDQTQ
GYQEMFKELEAYLAEITGFAKTSLQPNSGAQGELAGLMVIKAYFEHNGQHQRNIALIPSS
AHGTNPASAVMAGLKVVVVKCDEKGNIEVEDLRAKAEAHAENLACLMVTYPSTHGVFEES
ITELCDIIHQYGGKVYMDGANMNAQVGLTSPGRIGADVCHLNLHKTFAIPHGGGGPGMGP
ICCTEELSAFLPGNAVVKTGGENSINGISAAPWGSAGILPIPYAFISMMGGEGLTNATKY
AIFNANYIKSRLEKHFSILYTGTNGRCAHEMIVDCRPYKHTTGVEVEDIAKRLMDYGFHA
PTVSFPVAGTLMIEPTESESQAELDRFCDALIAIKEEIDEIAAGTYPQDNNVLVNAPHTL
QVITKENWDLPYSREKAAFPVESLKANKFWPSVSRIDSAYGDRNLICSCEPIEAYA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgctaattgatttgaattcgtcggaactgttccaagatagacaccaaggaaaatcagaa
agtgaaatctccgccatgtgtgcttctatcggggttaacagtctcgaagaattaattgac
caaactattccttctaacatcagaagtgaaaaggctttaaacctacctgccggcttgagt
gaaacggaattcttagagaagatcactacactagctgacaagaataaggtgttccgctcc
tttattggctgcggttattatgataccgtactaccaaaagtggttcagagaaacattctg
gagaatccggcttggtacacggcttatactccataccaggcggaaattgcgcaaggaaga
ttggagatgttacttaccttccaaaccgtagtttcagatttaaccggtatggaaattgcg
aacgcatccctactagatgaagggactgccgccggagaggccatgtccatgttagcaggt
ctaaggaaaggaacaaagaagaatgcacaaaccttcttcgtggctgaaaatgttcaccct
caagttttggatgtagttagaggtagagcgaaaggtatcggtattaatattgagattggg
aatccggaaacttttgatttcagcacctcagatgtatacggtgtattactacaaaacccg
ggtacatgtggagaagtaaaagattacactgacctgatcgcagctttacatgagcaggat
atcaaagtatgtttaaatacagacttactagccttaactctgattaagtctccggctgaa
atgggagcagatgtagccgttggaacttcccaaagattaggcgttccaatgatgtacggt
ggacctcacgctgcattctttgctacaaaagaagaatataaaagacaaattccgggtaga
atcataggtgtctctgtagatgcttctggtaacagagccttaagaatggcccttcaaacc
agggaacaacatatccgtagagaaaaagctacctccaatatatgtactgctcaagtatta
ttatctgtactttctgcagcatactgcctataccacggacctgaaggattgaaaagaata
gcttctaaggttcatggactaactactctttttgctaattctgtacaaggcttagattac
agagttgttaacgatacctattttgatacagtaactctagaggttcaagataatactaag
attcgtcaaattgctgaagccaaagaagtaaaccttcgttaccacggcactgaaaacatc
agcatctcttttgacgaaaccaaaacccttgctgatgtggcgcttctactagagattctg
gcagaagcaaaaggtacgaaagttgtagctcaattgaagaaagaagtagaatctaatcta
ccttctgcattattgagaactaccccttaccttcaacatcctatctttagctcataccgt
acagagcatgagatgttgcgttacttgaagagtcttgaaaacaaagacctctctctggta
cactccatgatttctttgggtagctgtaccatgaagttgaatgctacggctgaaatgatg
cctatcactcttccgggctttgcgcagatccatccttttgctcctttggatcaaactcag
ggatatcaggaaatgttcaaagaattggaagcttaccttgctgagatcactggttttgct
aaaacctccttacaaccaaactctggggctcaaggtgaattagcagggttgatggtcatc
aaagcttactttgagcataatggccaacaccaaagaaacattgcccttattccttcgtct
gcgcatggtacaaaccctgcttctgcggtaatggcaggcttgaaagtggtagttgtaaaa
tgtgacgaaaaaggaaacatagaagtagaggacctaagagcgaaagcagaggctcatgct
gagaacctagcttgcctgatggttacttatccttctactcacggggtatttgaagaaagt
attactgaactatgtgatatcattcaccaatatggaggtaaagtttatatggacggtgcc
aatatgaatgcacaggtaggtttaacctctcctggtagaataggtgctgacgtttgccac
ttgaaccttcataaaacctttgccattcctcacggtggtggtggacctggaatgggaccg
atttgttgcacagaagaactctctgcattcttaccgggcaatgcagtagtgaagactgga
ggtgaaaacagcattaacggtatctctgcggctccttggggtagtgcaggtatattacct
attccttatgcctttatcagcatgatgggtggagaaggcttaacaaatgctacgaaatat
gccatcttcaatgctaactatatcaagtctcgcttagagaagcacttctctatcctatat
acaggaacgaacggtagatgtgcccacgagatgatcgtagattgcagaccatataaacac
actactggtgtagaagtagaggatatagcaaaacgtttgatggactacggtttccatgcc
cctacggtttccttccctgtggctggaactttgatgattgagcctacagaatctgaatct
caagctgaacttgaccgattctgtgatgcattaatagccattaaggaagagatagatgag
atcgcagcaggaacgtatcctcaagataataacgtcctggtaaatgcacctcacacgctt
caggtaatcactaaagagaactgggatctaccatacagcagagaaaaggcagcattcccg
gtagagagcctgaaagccaataaattctggccttcggtaagtagaattgattctgcttac
ggagatagaaacttaatctgttcttgtgaacctattgaggcttacgcataa
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