Leishmania braziliensis: LBRM_20_6010
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Entry
LBRM_20_6010 CDS
T01113
Name
(RefSeq) conserved hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
lbz
Leishmania braziliensis
Pathway
lbz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LBRM_20_6010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbz04131
]
LBRM_20_6010
Membrane trafficking [BR:
lbz04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
LBRM_20_6010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_2
Vps39_1
Clathrin
CNH
Rad50_zn_hook
TPR_14
Motif
Other DBs
NCBI-GeneID:
12983256
NCBI-ProteinID:
XP_003723149
UniProt:
E9AIN3
A0A3P3Z0Y0
LinkDB
All DBs
Position
20_and_34b:complement(645826..648741)
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AA seq
971 aa
AA seq
DB search
MQAEEARHAALRIEAYRLVSLGDPIPHKIESITTYRTLVFVGTSDSKVAVYRVEACKESA
APLTLLQEITESRRHAVRQLTVVGKRRLLALVGDVLVVYHIHDDTSHSASGFQLRAVTTI
TGHKDTIAFHVKQQKGIISMAVLQRKRVTLYEASPTNLDFLLKVTVALPDGVKTLSWMGR
SIIFGGRKEYLLYNTTTASTSVLYPTPRSGAAPLVLPMAPVPEVLVASDGAGLRTLLYDG
SEVPGDSRILWATPPAEVRYEHPYVVSHHPSAPHHALQIRLPMLATLEDATAYPRSCLCQ
TIDLPKVVKVSQCHWIDYDCAMPSRSAPPDVLSYSPIVLADSDHRLHLLVRTSVAVQAEA
LAAAKLFAAADLLCRLCPHEVAPPTLQRIVMAGALDKFIAQQDYAGCFHDFSTIESDPRV
AIQLFPGFLRLDETPSSCPALPAEAPATIVVAALPALADYLHSQRATLVLLSGSASAEPV
QSQLRAVDRALVMSLCALKREEALMALLRGEIACDVADAAAILREHRQWVALTLLLEAHG
QYDEAVSQLHHLVSTSEERTEIPQPQLGALQELFQRHPFPAAKGDDYVAQSTLWEWLTSC
PSAHPLSTEDTAATCTIATAMMTALNFFRRRPLTQFHRLLEQHSSWVFGVVPAESAVRVF
FSEENVHHYGVALQVLQAYPEAPCTTPRLLLVVEYLFQLLADVRVRVTEPVIYERYWRGL
GELLFASPVKTVMETEKRQRLRDRLHEFLLTSPHVNLESAAAYFNAADIRSRCLPERAVV
HRRQGSHQAAISMFLNESECLADATAYARSVYADGSSDAFTALLEALLRPTAGAPRVTEA
LEVMNTCDGIDAAAVLPMLPDEMAFAQVSSFLLHALRANTTACRASAVYNSILQAKRLQS
EESCIRLSSRAVVLEEGMVCPVCQRRLRPDTVLAVYPNNVMLHQGCALDEHVCAATLHDY
RHDAYATLEDL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggaggaggcgagacacgcagcgctgcggatagaggcatatcggcttgtttcc
cttggagaccccatcccacacaagattgagtccatcacaacgtatcgcacgctcgtgttt
gtggggactagtgacagcaaggtggctgtgtaccgtgtagaagcctgcaaagagagtgcc
gcaccactgacgctgttgcaggaaatcacggagagtcggcggcacgctgtgcggcagctc
accgttgtcggtaagcgtcgcctgcttgccctcgtcggtgatgtccttgttgtctaccac
atccatgacgatacatctcactctgcgagcgggtttcagctgcgagccgtcacgaccatc
acagggcacaaagacaccatcgcctttcacgtgaagcagcagaagggcattatctccatg
gcagtgctgcagcgaaagcgcgtcaccctctacgaggcttcgcctaccaacctcgatttt
ctgctaaaagtgaccgtggcgctaccggacggggtcaaaactcttagctggatggggcgc
agcatcatctttggtgggcgcaaggaatacttgctctacaacaccaccaccgcctcgaca
tcagtcctctatccaacaccgcggtctggcgcagcgccgcttgtgctgcccatggcaccg
gtgccggaggtcctcgttgccagcgatggagcgggcttacgcacgctcctgtacgacggc
agcgaggtgcccggcgactcgcgtatactgtgggcgacaccaccggcagaagtgcgttac
gagcacccgtatgtcgtctctcaccatccgtcagcgccgcaccacgccttgcagattcgc
cttcctatgctagccacgctggaggacgccactgcttacccgaggagctgcctctgccag
accattgacctcccgaaggtggtgaaagtgtcgcagtgccactggatcgactacgactgc
gccatgccctcaaggtccgcaccgccggatgtgttgtcgtactcccccatcgtcctggca
gattccgaccaccgcctccacctgctcgtgcgcacctcggtggctgttcaggcagaggcc
ctcgctgccgcaaagctgttcgccgctgccgatcttctgtgccgcctgtgccctcacgaa
gtagcgccgcccacactgcagcgaattgtgatggccggggcgctggacaagtttattgcc
caacaggactacgccggctgtttccacgatttcagcaccatcgagtctgacccccgcgtg
gcaatccagctctttccggggttcctgcgccttgacgaaaccccatcgagctgcccagcg
ctccctgccgaggcacctgccaccatcgtggtggctgctctcccagcgttggctgactac
ctgcactcgcagcgtgccacattggtgctgttgagcggcagtgcgtctgctgagccggtg
caatcgcagctcagggcggtggacagggcgctcgtgatgtcactttgtgcactgaagagg
gaggaggcgctgatggcactactgcgtggcgagatcgcctgtgacgtagcagatgcagcg
gctatccttcgcgagcaccggcagtgggtggccctcacgctgctgctggaggcccatggt
caatacgatgaggcggtgtcgcagctgcaccacctcgttagcacgagtgaggagaggact
gaaataccgcagccccagcttggagcgctccaagagttgtttcagcgacatccatttcct
gcagcgaaaggggatgactatgttgcgcagtccactctatgggagtggttaacgtcctgc
ccatctgcgcatcccctctcgaccgaggacacagcagcgacatgtaccattgcgacagca
atgatgactgcgctgaacttttttcggcgtcggccgctgactcagtttcatcgactgctt
gagcagcactcttcctgggtgtttggtgtggtgcccgctgagagtgctgttcgcgtcttt
ttctctgaagagaatgtgcaccactacggcgtggcactgcaggtgctgcaggcttacccc
gaggcgccctgcacgacgccacggctactgcttgtcgtcgagtaccttttccagcttctc
gccgacgtgcgtgtgcgggtgacagagcctgtcatatacgagcgctattggagagggctc
ggtgagttgctcttcgcctctcccgtcaaaactgtcatggagacggaaaagcgtcagcgg
ctgcgcgaccgccttcacgagttcctgctgacatcgccgcacgtgaatcttgagtcggcc
gcggcttactttaatgcagcagacatacggtcgaggtgccttcctgagcgggctgtggtg
catcggcgtcagggtagccaccaagcggccatttcaatgtttctgaatgaatctgaatgc
ctggctgacgcaactgcctacgctagaagcgtgtatgctgacggcagcagcgacgccttc
acagcgctgctcgaggcgctgctgagacccactgcgggcgcgccgcgggtgacggaggcc
cttgaggtcatgaacacgtgtgacggcatagacgctgctgctgtgctgccaatgcttcca
gatgaaatggcgtttgcacaggtcagcagttttctgctccatgcgctacgtgccaacacg
acagcgtgtcgtgcttccgctgtgtataatagtatcttacaggcgaagagactccagagt
gaggaaagctgcattcgcctttcctcacgtgccgtcgtgcttgaggaagggatggtgtgc
cccgtgtgccagcgccggctccgtccagatacggtgctcgcggtgtatcccaacaatgtc
atgctgcatcaagggtgcgcattggatgagcacgtgtgcgcggccactctccacgactac
cgccatgatgcgtatgcgactctcgaggacttgtag
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