Legionella cardiaca: PXX05_02425
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Entry
PXX05_02425 CDS
T08869
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lcad
Legionella cardiaca
Pathway
lcad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PXX05_02425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcad03019
]
PXX05_02425
03009 Ribosome biogenesis [BR:
lcad03009
]
PXX05_02425
Enzymes [BR:
lcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PXX05_02425
Messenger RNA biogenesis [BR:
lcad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PXX05_02425
Ribosome biogenesis [BR:
lcad03009
]
Prokaryotic type
rRNA helicases
PXX05_02425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
adh_short
CMS1
UvrA_inter
AAA_19
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
WED43652
LinkDB
All DBs
Position
548494..550164
Genome browser
AA seq
556 aa
AA seq
DB search
MTQELLNFSALNLSATLLKALEDMKFKTPSPVQAQTIPLLLQGRDVIAQAQTGTGKTAAF
ALPILQRLSAKSQATQALILAPTRELAIQVAEQFELLSAHSNVSVSVLCGGQDYRRQLKQ
LREGAQIVVGTPGRILDHIDRGTLQLGNLTTFVLDEADEMLRMGFIEDVETILAKLPAEK
QIALFSATMPSRIRHIANSYLNNPESVEIRAETATVKAIEQRFLFASGAQKPDALLRILA
VEEYQGVIVFVRTKSSTEDVAQSLQQQGYRAMAIHGDITQALREKVIAQFRQGSIDILVA
TDVAARGLDVERVTHVINYDVPHDCETYVHRIGRTGRAGRSGVTVLFVTPKEARILNTIE
RHTRQRIEKIVVPNDHAIQMARQERFMANIKMRLQHEHLPSYQYLVEEFLKQNQVSAVDV
AAALALMLNQDKPWKRELPKPPRVAREARVQERDNNNFKSGRGQKSDRGRKQFRDDYPQE
LFRLDVGRVHGVKPGNIVGAIANEAGLESRYITGLKIHEDHSTVRLPQGMSKKIFQDLNG
AWVCGRQLKLTSLGNA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaattactaaacttttctgccctcaatttatccgcgactttattgaaagcg
ctggaggacatgaagtttaaaacaccatcaccggtccaggcacaaaccattcctttattg
ctacagggaagggatgttattgcgcaagcacaaacaggtactggcaagacggctgccttt
gcgctgccaattttacaacgtctatcagcgaaatctcaggcaacgcaagccttaattctt
gcgcctactcgcgagctagccattcaggttgcagaacaatttgagcttttgagtgctcac
agtaatgtctcagtctctgttctatgcggagggcaggattatcgacgtcaattaaaacaa
ttacgcgaaggagcacagattgtagtaggaactcctggtcgtatattggatcacattgat
agaggtacactgcaactaggtaatttgacaacctttgttcttgatgaagcagatgaaatg
ttacgaatgggctttattgaagatgtagaaacaattcttgccaagttgccagcagaaaaa
caaattgctttattctcagcaacaatgccatctcggattcgtcatatagcaaatagctat
ttgaataaccctgaatcagtagaaattcgtgctgaaacggcaacggttaaagcgattgaa
cagcgttttctatttgcttccggggctcaaaagccagatgctttgctacgcatattagcc
gtggaagaataccagggtgtgatcgtttttgtgcgcaccaagagcagtacagaagacgtt
gctcaatcactacagcaacagggctatcgtgcgatggcaattcatggggacattacgcaa
gcactacgtgaaaaagttattgctcaattcagacaaggatctattgatattctggtggca
accgatgttgctgcacgtggtttggatgtggagcgagttacccatgtaattaactatgat
gtccctcatgattgcgaaacctatgttcatcgaattggtcgaactggccgtgcgggccgt
agtggagtcactgtattatttgtaaccccaaaagaagcacgaattttaaatacgattgaa
cgtcatactcgccaacgtattgaaaaaattgtagttcctaatgatcatgcaattcaaatg
gcaagacaagagcgttttatggctaatatcaagatgcgtttgcagcatgagcatttacct
tcttatcaatatcttgttgaagagtttctcaaacaaaatcaggtttcggcagttgatgtt
gcagcggcgttggctctaatgctaaatcaggataaaccttggaagcgtgagctacctaaa
ccacctcgcgtggcaagagaagcacgcgtgcaggagcgcgacaataataacttcaaatct
ggtcgtggacagaaatcagataggggtagaaagcaatttcgagatgactatccacaagaa
ttatttcgtctcgacgtcggacgtgtgcatggtgttaagccgggtaatatcgttggagct
atagcaaacgaagcaggattagaaagtcgttatattacaggtcttaagattcatgaagat
cattctactgtgcgtttgccccaaggaatgtctaaaaaaatattccaggatttaaatggc
gcctgggtgtgtggtcgacagttaaaattaacatccttaggtaacgcatga
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