Leptogranulimonas caecicola: ATTO_16700
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Entry
ATTO_16700 CDS
T08581
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lcal
Leptogranulimonas caecicola
Pathway
lcal00521
Streptomycin biosynthesis
lcal00523
Polyketide sugar unit biosynthesis
lcal00541
O-Antigen nucleotide sugar biosynthesis
lcal01100
Metabolic pathways
lcal01110
Biosynthesis of secondary metabolites
lcal01250
Biosynthesis of nucleotide sugars
Module
lcal_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
ATTO_16700
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ATTO_16700
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ATTO_16700
Enzymes [BR:
lcal01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
ATTO_16700
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Motif
Pfam:
dTDP_sugar_isom
CK_II_beta
Motif
Other DBs
NCBI-ProteinID:
BDC91798
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Position
complement(1928883..1929464)
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AA seq
193 aa
AA seq
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MDQSITSGNFTFTPTSIDGVIIVDAKSYGDARGAFMETYKREDFVAGGIDCEFVQDNQST
STQGVLRGLHFQIHHPQAKLVRVVEGEVFDVAVDLRPGSPTFGKWEGAVLSADNHRQFFI
PQGFAHGFYVMSERAVFCYKCDDVYHPGDEGGLMWNDPDIAVQWPLIEGVEINLSQKDMN
HPSFAVYTCEQNL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtccatcacttctggcaacttcacttttactcctacctctatcgatggggta
atcattgtcgatgcaaagtcctacggcgatgcccgaggagcgttcatggaaacctataag
cgcgaggacttcgtggctggtgggatcgattgtgagttcgtccaggacaaccagagtacg
agcacgcaaggagtgcttcgtggccttcactttcaaatccatcatcctcaggccaaacta
gtacgtgtcgtagagggcgaagtattcgatgtggccgtcgatctgcgtcccggtagtccc
acctttggtaagtgggaaggtgcagtgctgtcagcagataaccatcgtcagtttttcatt
ccccaaggctttgcccatgggttctatgttatgagcgagcgcgcagtgttctgctacaaa
tgcgacgacgtatatcatcctggcgatgagggcggtcttatgtggaacgatcccgatatt
gccgtgcaatggccgcttatagagggcgttgaaataaatctttctcagaaggacatgaac
catccaagctttgcggtctatacctgcgagcaaaatctctag
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