Lysinibacillus capsici: ICJ70_08955
Help
Entry
ICJ70_08955 CDS
T08448
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lcap
Lysinibacillus capsici
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcap03019
]
ICJ70_08955
03009 Ribosome biogenesis [BR:
lcap03009
]
ICJ70_08955
Enzymes [BR:
lcap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ICJ70_08955
Messenger RNA biogenesis [BR:
lcap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ICJ70_08955
Ribosome biogenesis [BR:
lcap03009
]
Prokaryotic type
rRNA helicases
ICJ70_08955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_RecD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UNT57126
LinkDB
All DBs
Position
1786085..1787386
Genome browser
AA seq
433 aa
AA seq
DB search
MSKYTDYNFQPFLQDAIANLGFTEPTPIQKEIIPLLLKGKSAIGQAHTGTGKTHSFLIPI
VQRIDVEKQEVQAVITSPTRELAQQIFDALNQLIEGTAIQAKLFIGGTDKQRSIDKLKTQ
PQIVVGTPGRIRDLVSAQALFVHTAPILVVDEADLAFDMGFIEEIDGFASQMPEKLEMYV
FSATIPEKLQPFLKKYMEAPVHVHMNDKRPVAEGIDFVLVPVRSKSRNKRLLEVIEGINP
FLAVIFTNTRKTAEHVAGYLNEHGIRCGQIHGDLSPRDRKKMMKQIRDLDYQYIVATDLA
ARGIDIQGISHVINYEIPEDLEFFIHRVGRTARAGNKGTAITLFEPSDEDAVVRVEKMGI
PFVQKDVKDGEWSELKERHSRKNRVKQENEIDVKAKSLVRKPKKVKPGYKRNMKWEMEKI
KKRERRLKARGKK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatatactgattataattttcagccatttttgcaggacgccattgcaaatctt
ggctttacagaaccgacaccaattcaaaaagaaattattccgcttttattaaaagggaaa
agtgctattggacaggcacatacaggaacagggaaaacacatagttttttaattccaatt
gttcaacgtattgatgtagaaaaacaggaagtacaggccgttattacttctcctacacga
gagttagcacagcaaatttttgatgcattaaatcaattaatagaaggaactgctattcaa
gcaaaactatttattgggggtacggacaaacaacgctctattgataaattaaaaacacag
ccacaaattgttgttggaacaccaggacgtattcgtgaccttgtttcagcacaagcgtta
tttgtgcatacagcaccaattttagttgtcgatgaagcggatctagcttttgatatgggc
ttcattgaagagattgatggatttgcttcacagatgccagaaaagcttgaaatgtatgtt
ttttctgcaacaattccagaaaaacttcaaccatttttaaagaaatatatggaagcgcca
gtgcatgtccatatgaatgataaacgaccagtggcagaaggcatcgattttgtccttgta
ccagtgcgttcaaaatcgcgtaataaacgtttattagaagtcattgagggcattaatccc
tttttagctgttatctttaccaacacacgtaagacagcagaacacgttgctggctactta
aatgagcatggtatccgttgtggccaaattcacggtgatttaagtccacgtgatcgtaaa
aaaatgatgaagcaaatccgtgatcttgactaccaatacattgtagcaactgacttagct
gctcgtggtattgatatccaaggcatttctcatgttattaactacgagattccagaggac
ttagaattctttattcaccgtgttggtcgaacagcgcgtgcaggcaataaagggacagcc
attactttatttgagccatcagacgaggatgcagtagttcgcgtagaaaaaatgggcatt
ccttttgtgcaaaaagatgtaaaagatggcgaatggtcagagttaaaagagcgtcattca
cgtaaaaaccgtgtgaagcaagagaatgaaattgatgtgaaagcaaaatcgttggtacgt
aagcccaaaaaggtaaaacctggctataaacgtaatatgaagtgggaaatggaaaaaatt
aaaaaacgtgaacgtcgcttaaaggcacgcggtaaaaaataa
DBGET
integrated database retrieval system
