Lysobacter caseinilyticus: LYSCAS_16080
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Entry
LYSCAS_16080 CDS
T07541
Symbol
acrB
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lcas
Lysobacter caseinilyticus
Pathway
lcas01501
beta-Lactam resistance
lcas01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LYSCAS_16080 (acrB)
01503 Cationic antimicrobial peptide (CAMP) resistance
LYSCAS_16080 (acrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcas02000
]
LYSCAS_16080 (acrB)
01504 Antimicrobial resistance genes [BR:
lcas01504
]
LYSCAS_16080 (acrB)
Transporters [BR:
lcas02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LYSCAS_16080 (acrB)
Antimicrobial resistance genes [BR:
lcas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LYSCAS_16080 (acrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
BCT92584
LinkDB
All DBs
Position
1660975..1664112
Genome browser
AA seq
1045 aa
AA seq
DB search
MSRYFINHPVFAWVIAIMIVISGVLAIRGLGVESYPNIAPPQVGVFAAYPGANAETVERA
VTQIIEQQLTGIDNLDYFSASSGSDGSASLNLTFKPGTDPDIAQMQVQNKVSQATPRLPG
DVVQQGVTVSKSNSGFLLVIALKSSDPAIGKDELSDLLASNVLDQVARVPGVGSTQLFGG
QYSMNIWLNPDKLHAYGLSASDVLSAVRAQNVQFSAGQVGGEPSPETQMFTASVAAEGRF
TKPEEFENILLRANASGAAVRLRDVARVEISGSAHGFDLQWNGQPAAGFAVSLGPGENAL
EVAAAVKARMAQLQPSFPKGVEWFAPYDTSDFVRISVDEVIKTLGEAMVLVFLVMLLFLQ
NLRATLIPTLVIPVALLGTFLGMYVLGFTINQLSLFGMVLAIGIVVDDAIVVIENVERIM
TEEGLSPKEATRKAMHQITGAVIAITLVLAAVFIPSALQAGSAGAVYKQFALTIAMAMLF
SAFLALGFTPALCASLLKPSAHHEARNPIFRAFNKFYGKMSTIYVGHIGSAVRHAPRWMA
VFAALAIGCGFLFWKMPGSFLPEEDQGYAFAIVQLPPGATLRRTNAVFEQIRAKVDKMEG
FDGMMQVSGFSFIGQGENVGMAFIKLKPWDQRKITATEFIQNANGALFPIRDAQIFVANL
PTVNGLGQFGGFDMYLQDRTGQGRDALMGAMGTLLGKAGENKALVGVRPNTLEPSPQLKL
DVDRLQAQAMGLEVGDIYSAIQLMLAPIYVNDFVQGGRVKRVNMQADGPFRTGPESLAHY
YTPSNTKDADGLPTMIPLSNVVKAKWEVASPSLTRYNGFAAVEIVGSQAPGHSSGEAMNA
MQAIVEKDLPAGFGYDWAGQSHQEILSGSQTTMLMILSIIVVFLCLAALYESWSVPVAVL
LVVPVGVLGAVLLSMARGLPNDIYFKIGLITVIGLAAKNAILIVEFAIQERKEGKPLGQA
VVEAAKLRLRPILMTSLAFIMGVLPLAISTGAGANARHAIGTGVIGGMLAATFLGLLFIP
VFYAIVRRMLGDKLDVAPKIVHEDD
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttacttcatcaaccacccggtcttcgcctgggtcatcgcgatcatgatcgtg
atctccggcgtgctcgcgatccgcgggctcggcgtggagtcgtatccgaacatcgccccg
ccgcaggtcggcgtgttcgccgcctatcccggcgcgaatgcggaaaccgtcgaacgcgcg
gtcacgcagatcatcgagcagcagctcaccggcatcgacaacctggattacttcagcgcg
tcgtcgggctccgatggcagcgcctcgctcaacctcaccttcaagcccggcaccgatccc
gacatcgcgcagatgcaggtgcagaacaaggtgtcgcaggccacgccgcgcctgcccggc
gacgtggtgcagcagggcgtcacggtgtcgaagtccaacagcggcttcctgctcgtcatc
gcgctgaagtccagcgatccggcgatcgggaaggacgagctgtccgacttgctcgcctcc
aacgtgctcgaccaggtcgcgcgcgtgccgggcgtgggcagcacgcagctgttcggcggc
cagtactcgatgaacatctggctcaacccggacaagctgcacgcgtacgggctgtcggcc
agcgacgtgctgtccgcggtgcgcgcgcagaacgtgcagttctccgcgggccaggtgggc
ggcgaaccgtcgccggaaacgcagatgttcaccgcgtcggtcgcggccgaagggcgtttc
accaagcccgaggagttcgagaacatcctgctgcgcgccaacgccagcggtgccgcggtg
cgcctgcgcgacgttgcgcgcgtggagatctccggttccgcgcacggcttcgacctgcag
tggaacggtcagccggccgcgggtttcgcggtgtcgctcggcccgggcgagaacgcgctg
gaagtggcggcggcggtcaaggcgcgcatggcgcagttgcagccgagcttcccgaagggc
gtggagtggttcgcgccctacgacacatcggacttcgtgcgcatctcggtcgacgaggtg
atcaagacgctcggcgaagcgatggtgctggtgttcctggtgatgctgctgttcctgcag
aacctgcgcgccacgctcatcccgacgctcgtcatccccgtcgcgctgctcggcacgttc
ctgggcatgtacgtgctcggcttcaccatcaaccagctcagcctgttcggcatggtgctg
gcgatcggcatcgtggtcgatgacgcgatcgtggtgatcgagaacgtcgaacgcatcatg
accgaggaaggtttgtcgccgaaggaggccacgcgcaaggcgatgcaccagatcaccggt
gcggtcatcgcgatcacgctggtgctggcggcggtgttcatccccagcgccctgcaagcg
ggcagcgcgggcgcggtgtacaagcagttcgcgctcaccatcgccatggcgatgttgttc
tccgcgttcctcgcgctgggcttcacgccggccctgtgcgccagcctgctcaagccctcg
gcgcaccacgaagcgcgcaacccgatcttccgcgccttcaacaagttctacgggaagatg
agcacgatctacgtcgggcacatcggcagcgccgtgcggcatgcgccgcgctggatggcg
gtgttcgcggcgttggcgatcgggtgcggcttcctgttctggaagatgccgggcagcttc
ctgccggaagaagaccagggctacgcattcgccatcgtgcagctgccgccgggcgccacc
ctgcgtcgtaccaacgccgtgttcgaacagatccgcgcgaaggtcgacaagatggaaggc
ttcgacgggatgatgcaggtgtccggcttcagcttcatcggccagggcgagaacgtcggc
atggccttcatcaagctcaagccgtgggaccagcgcaagatcaccgcgaccgagttcatc
cagaacgccaacggtgcgttgttcccgatccgcgatgcgcagatcttcgtggccaacctg
ccgacggtgaatggcctgggccagttcggcggcttcgacatgtacctgcaggaccgcacc
ggccagggacgcgacgcgctgatgggtgcgatgggcacgctgctcggcaaggcgggcgaa
aacaaggcgctggtgggcgtgcgaccgaacacgctggagccttcgccgcagttgaagctc
gatgtcgatcgcttgcaggcgcaggcgatgggcctggaagtcggtgacatctacagcgcc
atccagttgatgctggcgccgatctacgtcaacgacttcgtgcagggcgggcgcgtcaag
cgcgtgaacatgcaggccgatggtccgttccgaacggggcccgaatcgctcgcgcattac
tacacgccctccaacaccaaggatgcggacggcctgccgacgatgatcccgttgtcgaac
gtggtgaaggcgaagtgggaagtcgcctcgccctcgctcacgcgctacaacgggttcgcg
gcggtggagatcgtgggttcgcaggcgccggggcacagctcgggtgaggcgatgaacgcg
atgcaggcgatcgtcgagaaggacctgcccgcgggcttcggatacgactgggcggggcag
tcgcaccaggaaatcctgtccggcagccagaccacgatgctgatgatcctgtcgatcatc
gtcgtgttcctgtgcctggccgcgttgtacgaaagctggtcggtgcccgtcgcggtgctg
ctggtggtgccggtgggcgtgctgggcgcggtgttgttgtcgatggcgcgcggattgccc
aacgacatctacttcaagatcggcctgatcacggtgatcggcctggcggcgaagaacgcg
atcctgatcgtcgagttcgcgatccaggaacgcaaggaaggcaagccgctgggccaggcg
gtggtcgaagccgccaagctgcgactgcgcccgatcctcatgacgtcgctcgccttcatc
atgggcgtgctgccgctggcgatctccaccggcgccggcgcgaacgcgcggcatgcgatc
ggcacgggcgtcatcggcggcatgctggccgccacgttcctcggcctgctgttcatcccg
gtgttctacgcgatcgtgcgcaggatgctgggcgacaagctggacgtcgcgccgaagatc
gtccacgaagacgactga
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