Lysobacter caseinilyticus: LYSCAS_25690 Help Entry LYSCAS_25690      CDS       T07541                                  Symbol lig3 Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism lcas  Lysobacter caseinilyticus Pathway lcas03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:lcas00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     LYSCAS_25690 (lig3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:lcas03400]     LYSCAS_25690 (lig3) Enzymes [BR:lcas01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      LYSCAS_25690 (lig3) DNA repair and recombination proteins [BR:lcas03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      LYSCAS_25690 (lig3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  BCT93545 LinkDB All DBs Position complement(2698482..2701016) Genome browser AA seq 844 aa AA seqDB search MSLTEYRRKRQFDKTREPAPGKPLPKGERPIFVVQLHHASRRHYDFRLQVGDALKSWAVP KGPSYDPKVKRMAVEVEDHPVSYASFEGDIPHGEYGGGHVALFDHGVWSTPYDPEAQLAK GHLRFELFGEKLKGEWHLVRSGKAARQPTWLLFKEKDAYAGPVEADELLDDVTPPPGAPK KAAKKTAKKIAKVAPKRRRKVDWAAKASKLPGAKKATLRNEAFEPQLAKLGDTAPSGAQW IHEVKWDGYRLVATMVGGKVRIWSRNAIEWTAKVPELRAALEALGVQSAAFDGELIAGRG TQADFNLLQATLSGEQQGALSYVLFDLLHLEGVDLRKAPLVERKALLEDLLSTPTPHLAY SSHVPGDEGDAAFALASEQQFEGIISKRAQGAYHAGRGDDWRKTKRLDSDEFAVVGTTPG QGARTGFGALLLARPDPEHGWSYAGRVGTGFTGELIREIVEHIGKRKTSTTPTVYVPPNA ITPADGKRATWFKPAFVVEVFIRGIGNSGVLRQPSLKTLRLDKDVDDLLDSDRAPAKKAA KKTATKRAGATARERAPAPETRLSSPTKIIFPDRGITKLQVAEYYRAVAPHLLAGIAGRP LSIIRCPSGAGKPCFFQKHHTAGLDVVRFVRLKEEAGINANYLVVDDLAGLMELVQFNAL EFHPWGSHADTPDIADRIVFDLDPGPNVPFAEVKRSAQQVHDLLQQLGLQSFLRTTGGKG LHVVVPLNPGNRWPLVKQFAKGFAEALAGSEPDRYLATATLKLRPGKIFVDYLRNGRGAT AVASYSLRARDGAPVAVPLAWRELAALKRGDAFDLDATVARLKKQRKDPWAGIDTIRQDL ASLG NT seq 2535 nt NT seq  +upstreamnt  +downstreamnt atgagcctgaccgagtaccgccgcaagcgacagttcgacaagacgcgcgagcccgccccg ggcaagccgttgccgaagggcgagcgccccattttcgtggtgcagctgcatcacgcgtcg cgccggcattacgacttccggctgcaggtcggcgatgcgctcaagagctgggcggtgccg aaggggccgagctacgaccccaaggtgaagcgcatggccgtggaagtcgaagaccacccg gtgtcctacgcatcgttcgaaggcgacatcccgcacggcgaatacggcggcgggcacgtg gccttgttcgaccacggcgtgtggtccacgccctacgacccggaagcgcaactcgcgaag ggacatctgcgtttcgagttgttcggcgagaagttgaagggcgagtggcatctcgtgcgc tcgggcaaggccgcgcgacagccgacgtggctgttgttcaaggagaaggacgcgtatgcc ggccccgtggaagccgacgaactgctggacgatgtgacgcccccgcccggtgctccgaaa aaagcggcaaaaaagaccgcgaagaaaatcgcaaaagttgcccccaagcgacgccgcaaa gtcgactgggccgcgaaggcttcgaagctccccggcgcgaagaaggccacgctccgcaac gaagccttcgaaccccaactcgcgaaactcggcgacaccgcgcccagcggcgcgcaatgg atccacgaagtgaagtgggacggttaccgcctcgtggcgacgatggtcggcggcaaggtg cgcatctggtcgcgcaacgccatcgaatggacggcgaaggtgccggagttgcgcgcggcg ctcgaagccctgggcgtgcaaagtgcggccttcgacggcgaactcatcgcgggccgcggc acgcaggcggatttcaacctgctgcaggccacgctgtcgggcgaacaacaaggcgcgttg tcgtacgtgctgttcgacctgctgcacctggaaggcgtggatctgcgaaaggcaccgctg gtcgaacgcaaggcgttgctcgaagacctgctgtccacgccgaccccccacctcgcctac agctcgcacgtccccggcgacgaaggcgacgccgcattcgcgctcgcgtcggagcagcaa ttcgaagggatcatctccaagcgcgcgcaaggcgcgtaccacgcggggcgcggcgacgac tggcgcaagacgaagcgcctggactccgacgagtttgccgtcgtcggcaccacgccgggg caaggcgcgcgcacgggcttcggtgcgttgctgctcgcgcggcccgatccggagcacggc tggtcgtacgccggccgcgtcggcacgggcttcaccggcgaattgatccgcgagatcgtc gaacacatcggcaagcgcaagacctccaccacgcccacggtgtacgtgccgccgaatgcg atcacgccggcggacggcaagcgcgcgacctggttcaagcctgcgttcgtcgtcgaggtg ttcatccgcggcatcggcaactcgggcgtgttgcggcagccgtcgttgaaaacgctgcgg ctggacaaggacgtggacgacctgctggattccgatcgcgcgcccgcgaaaaaggcggcg aagaagacagccacgaaacgcgccggcgccaccgcgcgcgaacgcgccccggcccccgaa acccgcctcagcagcccgacgaaaatcatcttccccgaccgcggcatcaccaagctgcag gtcgccgagtactaccgcgccgtcgcaccgcacttgctcgccggcatcgcaggccgcccg ctttcgatcatccgctgcccgagcggtgcggggaaaccgtgcttcttccagaaacaccac accgcaggcctcgacgtcgtgcgcttcgtgcgcctgaaggaagaagccggcatcaatgcg aactacctcgtcgtcgacgatctcgccggcctgatggaactcgtgcagttcaacgcgctc gagttccacccgtggggctcgcacgccgacacgcccgacatcgccgaccgcatcgtgttc gacctggaccccggccccaacgtgccgttcgcggaagtgaaacgatccgcgcagcaagtc catgacctgttgcaacaactcggcctgcaatccttcctccgcacgaccggcggcaagggc ctgcacgtcgtcgtgccgttgaaccccggcaatcgctggccgttggtgaagcaattcgcg aaagggttcgccgaagcgctcgcgggctcggagcccgatcgctacctcgccaccgccacg ctgaaactgcgcccggggaaaatcttcgtcgactacctgcgcaacgggcgcggcgcgacc gcggtggcgtcgtattcgctgcgcgcacgcgacggcgcaccggtggcggtgccgctggcg tggcgcgaactggccgcattgaagcgcggcgacgccttcgacctcgatgccaccgtcgcg cggctgaagaagcaacgcaaggatccgtgggcaggcatcgacacgatccggcaagacctg gcgtccctgggctga

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