Lemur catta (Ring-tailed lemur): 123621901
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Entry
123621901 CDS
T08326
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03013
Nucleocytoplasmic transport
lcat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123621901 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
123621901 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123621901 (THOC1)
03041 Spliceosome [BR:
lcat03041
]
123621901 (THOC1)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123621901 (THOC1)
Spliceosome [BR:
lcat03041
]
Complex C
Other components
EJC/TREX
123621901 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123621901 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
123621901
NCBI-ProteinID:
XP_045383937
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All DBs
Position
16:14155921..14216557
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AA seq
672 aa
AA seq
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MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSSTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGSHYVAQ
AGVQRLFTGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTT
CSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKK
MEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVL
TDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTS
DTKPTRAVRKRTAPEDFLGKGPNKKILMGNEELTRLWNLSPDNMEACKSETREYMPTLEE
FFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENM
VIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFATKLGEQW
KVLAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLNDL
AEGLTNDNETNS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaagtct
accagagaggccttgaacaacaaaaatatcaagccattattgaatactttcagccagtta
cccggcagtgaaaatgaaaaaaaatgtacccttgatcaagctttcagaggtgtactagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtactgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaagtacattctactctgctgggaaaaattatttactacgtatgtgc
aatgatctcttaagaagattatctaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggctaggcttttccctctatctgagaaatcaggatctcactatgttgcccag
gctggagtgcagcgactatttacaggtcttaacttgcagagtcagtttaatctggaaaat
gtcactgttttcaataccaatgagcaggaaagcaccctgggtcaaaagcacactgaggat
agagaagaaggaatggatgtagaagaaggggaaatgggagatgatgaagctccaacaact
tgctccattccaattgattacaacctgtatcgaaaattctggtcacttcaggattacttt
aggaaccctgtgcaatgctatgagaagatttcatggaaaactttcctcaagtattctgaa
gaagttttagctgtttttaaaagttataaattagatgatactcaggcctcaaggaaaaag
atggaagaattgaaaacaggaggagagcatgtatattttgcaaaatttctaacaagtgaa
aagttgatggatttgcaactgagtgacagtaactttcgtcgacacatcctgttgcagtat
ctcattttattccaatatctcaaggggcaggtcaaattcaaaagttcaaactatgtttta
actgatgaacaatcactttggattgaagatactaccaaatcagtttatcaactactatct
gaaaacccccccgatggagaaagattttcaaagatggtagagcatatattaaacactgaa
gaaaactggaactcatggaaaaatgaaggctgcccaagttttgtgaaagaaagaacatca
gataccaagcctacaagagcagtacggaagagaacagccccagaagacttcctagggaaa
ggacccaacaaaaaaattctgatgggaaatgaggagttgacaaggctttggaatctcagt
cctgataatatggaagcctgtaaatcagaaacaagggaatacatgccaactttggaggag
ttctttgaagaagccattgaacaggcagatcctgaaaacatggttgaaaatgaatataag
gctgtgaataattcaaattatggttggagagccctgagactgttagcgaggagaagccct
cacttcttccagccaaccaaccagcagtttaaaagtttgccagaatatctcgaaaacatg
gtaataaagctagccaaggaattaccacctccttctgaagaaataaaaacaggtgaggat
gaagatgaggaggataatgatgctttactgaaggaaaatgaaagtcctgatgttcggcga
gacaaacctgtaacaggggaacaaatagaagtatttgccaccaagttgggtgaacaatgg
aaagttctggctccctatttggaaatgaaagactcagaaattaggcagattgagtgtgac
agtgaagacatgaagatgagagctaagcagctcctagttgcctggcaagatcaagaggga
gtacatgccacacctgagaatctgatcaatgcactgaataagtctggattaaatgacctt
gcagaaggtctaactaacgacaatgagacaaatagttag
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