Lemur catta (Ring-tailed lemur): 123622369
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Entry
123622369 CDS
T08326
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03250
Viral life cycle - HIV-1
lcat04623
Cytosolic DNA-sensing pathway
lcat05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123622369 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
123622369 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
123622369 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcat03400
]
123622369 (SAMHD1)
DNA repair and recombination proteins [BR:
lcat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123622369 (SAMHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
123622369
NCBI-ProteinID:
XP_045384586
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All DBs
Position
17:21420237..21466693
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AA seq
661 aa
AA seq
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MLSGLAVRARLSERLRAGWAPRCLTALCRLPSAVMQRAESEQPSKRPRHDGSPRTPPSTP
SAAAGRSPGLELHPDHKTWGPEQVCCFLQRSGFKEPGLLKNFRENKITGSLLSYLDESHL
ETLGVSSLWERKKLLSHIQRLNQTLIDTMKVINDPIHGHIELHPLLIRIIDTPQFQRLRY
IKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRALCEKQPELQISERDMLCVQIAGLCH
DLGHGPFSHMFDGRFIPLARPELKWTHEQGSVKMFEHLINSNGLKAVMEYYGLVPEEDIC
FIKEQITGPLESPIKKDSVWPYKGRPKEKSFLYEIVANKRNGIDVDKWDYFARDCHHLGI
QNNFDYKRFIKFARVCEVDNKMLICTRDKEVGNLYDMFHTRNCLHRRAYQHKVGNIIDKM
ITDALLKADSYIEITGAEGKKYSISTAIDDMEAFTKLTDNIFLEILYSTDPKLDAAREIL
KNIECRNLYKYVGETQPSGEKIKRENYECLPKEVADAKPTEVSLEAELKAEDFIVDVINM
DYGMEDKNPIDHVRFYCKSDPSKAITIAKNQVSQLLPEKFAEQLIRVYCKKTDEKSLYAA
QQHFVQWCINKNFTKPQDGDVVAPLITPRKREWNALLSAPNPARPGEAFKAKVQLFKDGS
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcggactcgctgtccgcgccaggctgtcagagcgcctgcgcgccggctgggcg
ccgcggtgcttgactgcgctgtgccggctgcccagtgcagtcatgcagcgagccgagtcc
gagcagccctctaagcggccccgacacgatggcagcccaagaaccccaccgagcactcct
tccgcagcggcaggcaggtccccgggcctggaactccaccccgaccacaagacgtggggc
ccggagcaggtgtgctgctttctacagcgcagtggcttcaaggagcccgggctgctgaag
aacttccgagaaaataaaatcacaggctcattactgtcctatcttgatgaatctcatctt
gaaactcttggagtaagttccttgtgggaaaggaagaagctgcttagtcatatccagcga
ctgaatcagactctcattgatacaatgaaggtaattaatgatcctatccatggccacatt
gagctccaccctcttctcatccggatcatcgatacacctcaatttcagcggcttcgatac
attaaacaattgggaggtggttactatgtttttcccggagcttcacacaatcgatttgaa
catagtctaggggtagggtatcttgcaggatgtctagttcgtgcactatgtgaaaaacaa
ccagagctgcagataagtgaacgagatatgctctgtgttcagattgctgggctttgtcat
gatctaggtcatgggccattttctcatatgtttgatggaagatttattccacttgctcgc
ccagagttgaaatggacgcatgaacagggctcagttaagatgtttgagcacctaattaat
tctaatggactcaaagctgtcatggaatactatggtctcgtccctgaagaagatatttgc
tttatcaaggaacaaattacaggaccacttgaatcacctatcaaaaaagattctgtgtgg
ccatataaagggcgtcctaaagagaaaagcttcctttatgagatagtggctaataaaaga
aatggcattgatgtggacaaatgggattattttgccagggactgccatcatcttggaatc
caaaataattttgattacaagcgctttattaagtttgcccgtgtctgtgaagtagataat
aagatgcttatttgtactagagataaggaggttggaaatctgtatgacatgttccacact
cgtaactgtttacaccgtagagcttatcaacacaaagttggcaacatcattgataaaatg
attacagatgctttgctcaaagcagactcctacattgagattacaggtgctgaaggaaaa
aagtatagcatttctacagcaattgatgacatggaagccttcactaagctgacagataac
attttcctggagattttatactctactgatcccaaattggatgcagcacgagagatttta
aaaaacattgaatgccgtaatctatacaagtatgtgggtgagactcagcctagtggagag
aagattaaaagggaaaactatgaatgccttccaaaagaggttgccgatgctaaacctact
gaagtatcgctggaagctgaactgaaggctgaagattttatagtggatgttatcaacatg
gattatggaatggaagacaaaaatccaattgatcatgttcgcttctattgtaagagtgac
cccagcaaagcaatcacaattgctaaaaatcaggtttcacagcttctgccagagaaattt
gcagagcagctgattcgagtgtattgtaagaagacggatgaaaagagtttgtatgctgca
caacaacattttgttcagtggtgcataaacaaaaacttcaccaagccacaggatggcgat
gttgtagccccacttataacgcctcgaaagcgggagtggaatgccttgctttcagcccca
aatccagctcgtcccggagaagcattcaaagccaaagtccagctttttaaggatggttca
gtgtaa
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