Lemur catta (Ring-tailed lemur): 123639849
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Entry
123639849 CDS
T08326
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcat04121
]
123639849 (PDZRN4)
Enzymes [BR:
lcat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123639849 (PDZRN4)
Ubiquitin system [BR:
lcat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
123639849 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
123639849
NCBI-ProteinID:
XP_045409970
LinkDB
All DBs
Position
6:complement(64445583..64508791)
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AA seq
707 aa
AA seq
DB search
MNASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPMEHEFYEDNEYISSLP
ADADRTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSKVDPNSIAAKDGRIRE
GDRILQINGEDVQNREEAVALLSSDECKRIVLLVARPDIQLDEGWLEDERNEFLEELNLE
MLEEQHNEAMQHTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRNDESSE
QENAAEDPNSTSLKSKRELGQSQDTLGSVELQYNESFVSGEYIDSDCTGNQDEECERFRQ
LLELKCKIRNHGEYDLYYSSSTIECNQGEQEGVEHELQLLNEELRNIELECQNIMQAHRL
QKVTNQYGDIWALHDGGFQNYNTSIDMQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTP
LTVDRSPDSSLPRMINLTNKKNLRSTMAAHQSSSGQSNKESTSTKTKTAEQGCSMENKEK
ILESDQLPDQEKTVSEHIPYLSPYHSSSYRYTNIPAHARHYQSYMQLIQQKSAVEYAQSQ
LSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDD
DTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEVNILE
LSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccagcactcagacggatatcaccttcgaacacatcatggccctggccaagctt
cggccatctacccctccagtgccagacatctgtccatttctgctctcagacagctgccat
tctcttcatccgatggagcatgaattttatgaggacaacgagtatatttccagcttgcct
gctgatgcagacagaacagaggactttgaatatgaggaggtcgagttgtgtcgtgttagc
agtcaagagaagctgggcctgacagtctgttaccgaacagatgatgaagaagacaccggc
atttatgtcagcaaggtagatccaaatagcattgctgccaaagacggccgaattcgagaa
ggggatcgtattttgcaaataaatggggaagatgtccagaatcgagaagaagccgtggcc
ttgctgtctagcgacgagtgtaagagaatcgtgctgctcgtggcaaggccagacattcag
ctggatgaaggctggctagaagatgaaaggaatgagttcttagaggagttaaacctggag
atgttggaagaacagcataatgaagcgatgcagcacacggccaatgaggtggagcagcca
aaaaagcaagaagaagaagaaggcacaacagacacagcaacatcctcatccaacaaccat
gagaaggacagtggagtggggcgcacagatgaaagcttgcgcaatgatgagagctcagag
caagagaacgccgctgaggaccccaacagcacatctttgaagagcaagagagagctgggg
cagagccaagacactctaggaagcgttgaacttcagtacaatgagagcttcgtgtctggt
gaatacatagattccgactgcactggcaaccaagatgaggagtgtgaaagattcaggcag
ctcttggagctcaaatgcaagattcgaaaccatggagagtatgacctgtattattcgagc
agcacaatcgaatgcaatcaaggggagcaagagggagtggagcatgaactgcagttgctt
aatgaagagctgagaaacattgagctcgagtgccagaacatcatgcaggctcacaggctc
cagaaagtgaccaaccagtatggagacatctgggcattgcatgatggaggattccagaat
tataacaccagcatagatatgcagaggggaaaactagatgacatcatggaacatccagaa
aagtctgacaaggacagttctagtgcttacaacacagctgagagctgcagaagtactccc
ctcactgtagaccgttcccctgacagttcccttccaagaatgatcaacctcaccaataag
aaaaacctgagaagcacaatggcagcccatcagtcctcttctggacagagcaataaggag
tcaacttccaccaaaaccaaaaccgctgagcaaggttgtagcatggaaaacaaggagaag
atactggaaagcgaccagcttcctgaccaagagaagacagtcagcgagcacatcccttac
ctctctccttaccacagctcttcatataggtacacaaacatcccagcacacgcccggcat
tatcaaagctacatgcagttaattcagcagaaatctgcagtggagtacgctcagagccag
ctcagtctggtgagcatgtgcaaggagtctcagaagtgctcggagcccaagatggagtgg
aaggtgaagattcggagcgacgggacaaggtacatcacaaagagacccgtgcgagaccga
attctgaaggaacgtgccttaaagatcaaggaggagcgcagtggcatgaccacagatgat
gacaccatgagcgagatgaagatggggcgctactggagcaaagaggagaggaagcaacac
ctggttcgggccaaagagcagcgccggcgccgggagttcatgatgcggagccggctggag
tgtctcaaggagagtccccagagcggcagcgagggcaagaaggaggtcaacatcctcgaa
ctgagccacaaaaagatgatgaaaaagaggaacaagaaaattttggacaactggatgaca
atccaagaactgatgacccatggggccaagtctcctgatggcacgagagttcacaatgcc
ttcttgtcagtcaccactgtatga
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integrated database retrieval system
