Lemur catta (Ring-tailed lemur): 123648629
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Entry
123648629 CDS
T08326
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03022
Basal transcription factors
lcat03420
Nucleotide excision repair
lcat05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123648629
09124 Replication and repair
03420 Nucleotide excision repair
123648629
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
123648629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123648629
03400 DNA repair and recombination proteins [BR:
lcat03400
]
123648629
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123648629
DNA repair and recombination proteins [BR:
lcat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123648629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
VWA_3
IBR
Motif
Other DBs
NCBI-GeneID:
123648629
NCBI-ProteinID:
XP_045422514
LinkDB
All DBs
Position
12:44589334..44616623
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHIASLKKAVDMTCHGEPSLYNSLNIAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQETSLEEYNGERFCYGCQGELKDQHVYIC
TVCQNVFCVDCDVFVHDSLHCCPGCIHKIPSHSGI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaaacggtgggaaggaggctatgaaagaacatgggag
atccttaaagaagatgagtctggatcacttaaagctacaatagaagacattctattcaag
gcaaagaggaaaagagtatttgagcaccatggacaagttcgacttggaatgatgcgccac
ctttatgtggtagtagatgggtcaagaacaatggaagaccaagatttaaagcccaataga
ctgacatgtactttaaagttgttggaatacttcgtagaggaatattttgatcaaaatcct
attagtcagattggaataattgtaactaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaaggaaacacatagcatccctgaagaaagctgtagatatgacctgccat
ggagaaccatctctttataattccttaaacatagctatgcaaactctaaaacacatgcct
ggacatacaagtagagaagtcctaatcatcttcagcagccttacaacttgtgatccatct
aatatttatgatctaatcaagaccctaaaggcagcaaaaattagagtgtctgttattgga
ttgtctgcggaggttcgagtttgcactgtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattacaaagagttgctaacacatcatgttagtcctccacct
gccagctcaagttctgaatgctcacttattcgtatgggatttcctcagcacactattgct
tctttgtctgatcaagatgcaaaaccctctttcagcatggcgcatttggatagcaatact
gagccagggcttacattaggaggctatttctgtccacagtgtcgggcaaagtactgtgag
ctacctgttgaatgtaaaatttgtggtcttactttggtgtcagctccgcatttggcacgg
tcttaccatcatttatttcctttggatgcttttcaagaaacttccctagaagaatataat
ggagaaagattttgttatggatgccagggggaattgaaagaccaacacgtctatatttgc
actgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcatgattctctacac
tgttgtcctggctgtattcataagattccaagtcattcaggtatttga
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