Legionella clemsonensis: clem_06665
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Entry
clem_06665 CDS
T05016
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lcd
Legionella clemsonensis
Brite
KEGG Orthology (KO) [BR:
lcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcd03009
]
clem_06665 (rlmD)
Enzymes [BR:
lcd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
clem_06665 (rlmD)
Ribosome biogenesis [BR:
lcd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
clem_06665 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_11
TRAM
MTS
Cons_hypoth95
PCMT
Ubie_methyltran
RrnaAD
Methyltransf_15
Met_10
Methyltr_RsmB-F
Methyltransf_4
Methyltransf_23
Methyltransf_12
UPF0020
DOT1
CMAS
PrmA
Methyltransf_32
DREV
FtsJ
Motif
Other DBs
NCBI-ProteinID:
ASQ45888
UniProt:
A0A222P204
LinkDB
All DBs
Position
1502969..1504303
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AA seq
444 aa
AA seq
DB search
MSRRRQRLPAETIIAEVEKFSHDGRGIARINGKTTFIQGALPNEKVSFQYTRVKSDFDEG
KIVAILSPSTTRVEPSCSHYTLCGGCSLQHLNEQTQIHEKQKLLLDLLKRVGHCEPQIIL
DSLSSDSWHYRNKARLSVRYVEKKQRSLVGFREKNNPRFITEIKECPVLHKSISEEISNL
RLLIDSFEDPRIIAQIEVAVGDDDIALIFRNLHSLTHDDQEKLRAFGARTNFRLFLQPGG
NETVELFYPSGSSEFLTYTLFRENIKFKFYPTDFTQVNAKLNQLMVALALDLMNLTSNDT
VLDLFCGLGNFSLPMAKHCARVVGVEGSKAMVERAQMNAQANGLNNAEFFCANLEKLEEI
TKLTTQHFTKLLLDPPRSGAMEVVKQIESLHPERIVYVSCNPATLARDADILVNHKGYCL
KSAGVMDMFPHTAHVESIALFEKG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaagacgacaaagattaccagccgaaacaatcattgcagaagtggaaaagttt
agtcatgatggtcgtggaattgctcgtataaatggcaaaactacttttattcaaggtgct
cttcctaatgaaaaggtttcatttcaatatacccgagttaaaagtgattttgatgaaggc
aagattgttgccattctctctccatcgactactcgtgtagaaccttcttgttcacattat
actctttgcggtggttgctccttacagcatttaaacgagcaaacacagattcatgaaaag
cagaagttactgctggatttattaaagcgagttggtcactgtgaacctcaaattatcttg
gattcacttagcagtgacagttggcattatcgcaataaagccaggttaagcgttcgttat
gtcgagaagaaacaacgtagtcttgttggtttcagagaaaaaaataatccacgcttcatt
actgaaatcaaggaatgtccggtcttgcataaaagcatcagtgaagagatttctaactta
cgcctgttaattgattcgtttgaggatccacgaattattgctcaaatcgaagtcgcagta
ggggatgacgatattgccttaatttttcgtaatttacattcactaacccatgacgatcaa
gaaaagcttcgagcatttggcgccagaacaaattttcgcctatttttacaaccaggagga
aacgaaactgtagagctcttttatccttctggaagctctgaatttttaacgtacacactc
tttagagaaaatattaaatttaaattttatcccactgattttacccaggtgaatgcaaaa
ttaaatcaattaatggtggctttggcattggatttaatgaatttgacttccaatgatact
gtactggatctgttttgcggtctgggcaatttttcccttcctatggcaaaacattgtgcc
agggtagtcggtgttgaaggaagtaaagcgatggttgagcgcgcccaaatgaatgcgcag
gcaaatggtctaaataatgcggagtttttctgtgccaaccttgaaaaactggaggaaatt
actaaattaaccacccagcattttaccaaactgttactcgacccgcctcgttcaggtgct
atggaagtagttaaacaaatagaaagtcttcaccctgagcgtattgtttatgtttcttgt
aatccagcaactttggcaagggatgctgatattctggttaatcacaaaggctattgttta
aagtccgccggtgttatggatatgttccctcatacagctcatgttgaatcgatagcttta
tttgagaaaggataa
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