Lates calcarifer (barramundi perch): 108872899
Help
Entry
108872899 CDS
T04895
Symbol
pcgf5b
Name
(RefSeq) polycomb group RING finger protein 5-A isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108872899 (pcgf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108872899 (pcgf5b)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
108872899 (pcgf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-Nse
zf-RING_10
zf-rbx1
TRAF3_RING
zf-RING_6
Actin_micro
zf-C3HC4_3
zf-C3HC4_5
DUF1272
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108872899
NCBI-ProteinID:
XP_018516320
UniProt:
A0A4W6BWZ4
LinkDB
All DBs
Position
LG16_LG22:19797728..19819494
Genome browser
AA seq
247 aa
AA seq
DB search
MAATGRKHLVRDFNHFITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPKCGIQ
VHETNPLEMLRLDNTLEEIIFKLVPGLREKEEQQELEFWRKNQPKENGQAENLRCQRLGL
PDVGGDGGDGDGDDGDGGGDDDYHRSDPQIAICLDCLRNTGQSGESTVTDLMKRFIRCSS
RVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGRDHTLEFIYMTRWRLHGENTYPMVLEY
RPRIDFG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccggaaggaagcacttggtcagagactttaatcatttcattacctgctac
ctatgtcgaggctacctgattaaaccgaccacggtcaccgagtgcctgcacaccttctgt
aagagctgtattgtgcagcactttgaggatagtaatgattgtcctaaatgtggcattcag
gtccatgagactaacccactggagatgctcagattggacaacaccctggaggagatcatt
ttcaagctggtgcctggactcagagaaaaagaggaacagcaagaacttgaattctggagg
aagaaccagccgaaagaaaatggccaagcagaaaacctgagatgtcagaggcttgggctg
cccgatgttggaggcgacggcggtgatggtgatggtgacgatggtgatggtggtggcgat
gacgactaccacagaagtgatcctcaaatagccatctgtctggactgcctacgtaacacg
ggacagtcaggggagagcactgtcacagatttgatgaagaggttcatccgctgctccagt
agagtcactgtgggaacaattaagaagtttctcagtcttaaactaaagctgcctagctca
tatgagctggatgtgctgtgtaatggagagatcatgggcagagatcacactctggagttc
atctacatgacccgatggaggctacatggagagaatacatatcccatggttcttgagtac
cggccacgcatcgactttggctga
DBGET
integrated database retrieval system
