Lates calcarifer (barramundi perch): 108874906
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Entry
108874906 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: pleckstrin homology domain-containing family H member 1
KO
K24020
pleckstrin homology domain-containing family H
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108874906
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
108874906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MyTH4
PH
FERM_M
PH_11
PH_3
Motif
Other DBs
NCBI-GeneID:
108874906
NCBI-ProteinID:
XP_018518989
LinkDB
All DBs
Position
LG19:18304882..18332137
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AA seq
1428 aa
AA seq
DB search
MADVLESGGSGAVGAASVDWQKRCIALEMQLLRFRLQAGKIRELLAEKMQELEQRVTEAD
QRAESAEKQIHVMEEKLKSANIQTSESESSLYRKYQDLTNQVQEKDAVIKRLEMQLEKQI
LVRAQEAKIIEEKAAKIKDWVTFKLREMEQENQQLKMANLKQTEQIILLQDKLQSLLEKP
ASSGSPATSPVMDTHLVPNSPLFPPSCPGTPPAQDDSWRQTGPRGAASNIKISPTDVKRP
PEQVSIGICLGDLAAHDALSPGWSRERPSSPVSISRPELPVDPEGEEGCSDRDNSSDELN
SKFRSQCLHSSSSSSSSSSAYEMAHGPSSPEPSIRITPKSPLLSRSPSTNNPFPNPPQPC
GHQSGTSMTLPKVRTPLTPRDSIQLVKKHYSQPQPSLDRLHHLNVNIDIMTPSSTSSTLK
STGTSTSPFSQVVEETDIDDGLPDSMDGVVEGSGSEEESSRDGVSFVGLAEELERLDPEI
LKPPTPPLHRFPSWESRIYAVAKSGMRVSEATPGARGPGRGSNLPQYPAAGPFTQLIYKN
INVPVYTTLKGKATQISSVPLPDDDSGSEDDSSSLASLRTSILSPDRKGSVPGSPRAVKR
GVSMSSISSESDYAIPPDAYSLDSDYSEPEHKVQRTSSYSCESTGPEMLEKSGYLLKMGS
QVKAWKRRWFILRNGEILYYKSPSDVIRKPQGQIELNSSCRIMRGEGAQTFQLITEKKTF
YLTADSPNILEEWIRVLQNILKVQASSPVTVETTAKPTVRGWLTKVKHGHSKLVWCSLVG
KVFYYYRNQEDKLPLGQLQMREASVQEVDRSCDSDEDYEAGSRGFLSSHCTLVVQPRDQS
PTYLLIGTKQEKDTWLYHLTVAAGSSATFKVGTDYEQLIGKLLDAEGDPESALWRSEALS
FSKEGLRSPLTTLPSEALQTEALKLFKSCQLFINVLVESPSVDYHTSLAQNALQVCLTHP
ELQNEMYCQLIKQTNHRTPHNYSLTQCWQLLSLCVALFLPQQHFLWYLRQYLQRNADPRS
EVGKYAVYCQRSVERTLQNGEREAKPSRMEIVSILLRNPYHHSLPFSIPVHFMNNTYQVV
GFDGSTTVEEFLNTLNQRIGMRKPQLSGFALFTDDPSGKDLEHCLQPSAKICDVISKWEQ
ALKELHPGKNEGTRIVRLTYKSRLCFRSQVKGETERERLLLAYQVNDEVQQGHFPVNKEL
ALEVAALMAQVEHGDLERPAVSSPTGSPQSKSQLILLQALERFYPKRYKQDCSSEQLRDL
TERLATKWSMLRGCSASECVRIYLTVARKWPLFGAKLFSAKPVPPSPVEQSQVWLAVNED
GLCVLDYTMHTLVTYCYQSVITFGGCRDDFMVVTSQQREPGVGKKSVEKLVFAMAKPKIL
ELTLLMASYINHWNPSLPSASQQPLGHWDVDSRHFPAMNYTTKGPTLL
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtgctggagagcggcgggtcaggagctgttggagcggccagcgtggattgg
cagaaacgctgcatcgctctggagatgcagctactgaggttccgactgcaggcggggaaa
atccgagagctgctggcagagaagatgcaggagctggagcagagggtgacggaggccgac
cagcgggcggagagtgctgagaaacagatccatgtcatggaagaaaagctgaagtctgca
aacatacaaaccagcgaatcagagagctccttgtacagaaagtatcaagacctgaccaat
caggttcaagagaaagatgctgtgataaagagattagagatgcagctggaaaaacagatc
ttagtcagagcccaggaggcaaaaattattgaggaaaaggctgctaagattaaagactgg
gtcacctttaagctcagagagatggagcaagagaaccagcagctgaaaatggccaacttg
aagcagacagaacagataatcttgctgcaggacaaactgcaatcactcttagagaaacct
gcgtcctcaggatcccctgccacctcccctgtaatggatacccacctggtgcccaacagc
ccgctgtttcctcccagctgccccggcacaccacctgcccaagatgacagctggagacag
acaggtcctcgtggggcggcctctaatatcaagatctcaccaacagatgtgaaaaggcct
cctgaacaggtcagtatagggatttgcctcggagaccttgcagcccatgatgctctctct
ccgggttggagcagggagcgtcccagcagccctgtttccatcagcagaccagagctccca
gtggacccagagggtgaggagggatgctcggacagagacaactcctctgatgagctcaac
agcaagttccgctctcagtgccttcactcatcctcgtcctcttcgtcttcgtcctcggct
tacgagatggcccacggaccgagctccccggagccgtccatcagaataacacccaaaagc
ccgcttctgtcgcgttccccatccaccaacaaccccttccccaatcctccccagccctgt
ggtcaccagtcaggcaccagcatgactttacccaaagtacgaactccgctcacccccaga
gacagcatccagctggtcaagaagcactacagccagccgcagcccagcctggacagactc
caccatctcaacgttaacatagacatcatgaccccatcctccacctcctccactcttaag
agcaccggtacttccacctcgcccttctctcaggttgtggaagagacagacattgatgat
gggcttcccgacagcatggacggggtggtggagggatcaggatcagaggaggagtcatcc
cgggacggagtctcctttgtggggcttgcagaagagctggagcggttggatccagaaatt
ctcaagcctccaacgcctcctttacaccgctttccttcatgggagagtcgtatctatgct
gtggctaagtcgggaatgagagtatcagaggccactcctggagccaggggccccggacga
gggtccaacttaccccagtacccagcggcaggtccgttcacccagttgatctataagaat
attaatgtaccagtctataccacactgaaagggaaagccactcagatcagcagtgtacct
ctgcctgatgatgactctgggtcagaggatgacagcagctctttggccagtttacggacc
tccatcctgagcccggacaggaagggcagtgtccctggaagcccacgtgccgtcaagaga
ggtgtgtccatgtcctccataagctccgaaagtgactatgccattcctcctgatgcctac
tctctggacagtgattactcagaaccggaacataaagtccagcggacatcctcctactcc
tgtgaaagcactgggcctgagatgctggagaagtctgggtacctgctgaagatgggcagt
caggtgaaagcctggaaacgtcgctggttcatcctaaggaatggagagatcctctactac
aaatctcctagtgacgtgatcaggaaacctcagggtcagattgagctcaactcgtcctgc
cgtataatgcgtggagaaggtgcacagacatttcaattgattacagagaagaagaccttc
tatctgaccgccgactcacccaacatcctggaggagtggatcagagtcctgcagaacata
ctcaaagtccaggccagcagccctgttactgtggagaccactgccaagcccactgtgaga
gggtggctcacaaaggtcaaacatggacactcaaagctggtgtggtgttctctggttgga
aaagtcttctactactatcgtaaccaggaagacaagttgcctctgggtcagctgcagatg
cgtgaggcatcggtacaggaagtggatcgttcctgtgattcagatgaggactacgaggca
ggtagtcgaggcttcctctcctcccactgcaccttagtggtccagccaagagaccagagt
cctacgtacctgctcattggcaccaagcaggagaaggacacatggttgtatcacctgact
gtggcagccggcagcagcgcaaccttcaaggtggggacagactacgagcagctgattggt
aaactccttgatgcagagggagacccagaatcagccttgtggaggagcgaggccttgagc
ttttctaaggagggtctgcgctcgcctctcaccactctgccctctgaggctctgcaaaca
gaagctctcaagcttttcaagtcctgtcagctcttcattaacgtactggtcgagtctcca
tcagtcgattaccacacatccctggcccagaacgctttgcaagtgtgcctgacccacccg
gagctgcagaatgaaatgtactgtcagcttatcaagcagaccaaccaccgcacgccacac
aactactccctcacgcagtgctggcagctgttgtctctgtgcgtggctctgttccttcct
caacaacatttcctctggtacctgagacagtacctacaacgcaacgctgacccaaggagc
gaggtagggaagtacgcagtgtactgtcagaggtctgtggagcgaacgctgcagaacgga
gagcgcgaggccaaaccttcacgtatggagatcgtctccatcctgctgaggaacccctac
caccattcactgccgttcagcatcccagtgcacttcatgaacaacacctatcaggtggta
ggtttcgatggctccaccacagttgaagagttcctcaacacactgaaccagaggattggc
atgaggaagcctcagctgtctgggtttgccctcttcactgatgatccatctggcaaagac
ctggagcactgcctgcagccgtctgccaagatctgtgatgtaatttccaagtgggaacag
gccctgaaggaactgcaccctgggaaaaacgagggcacgcggattgttcgactaacgtac
aagagcagactgtgtttcagatctcaggtgaaaggagagacggagcgagagcgcctcctg
ctggcataccaggtgaatgatgaagttcagcaaggccacttccctgtgaacaaagagctg
gctctggaggtggctgccctcatggcacaggttgaacatggtgatttggagcgaccggct
gtctcctctcctaccggctctcctcagtctaaatctcagctgattctcttgcaggccctg
gagcgcttctaccccaaacgctacaaacaggactgcagctcagagcagctcagagacctt
actgagcgtctggccactaagtggtctatgctacgtgggtgcagtgcatccgagtgtgtg
agaatatatctaactgtggctcggaaatggcccctgtttggagccaaactcttcagtgcc
aagcctgtccctccttctccagttgagcagagtcaggtgtggctggcagtcaatgaggat
ggactgtgtgtgctggactacacaatgcacacgctggtcacgtactgctaccagtctgtg
attacctttggtggctgtcgtgatgatttcatggtggtcacgagccagcagagggagccc
ggagtcgggaagaagagcgtggagaagctggtctttgcaatggctaaaccaaagatactg
gagctgactctgctcatggcgagctacattaaccactggaaccccagcctcccgtctgcc
tcgcagcagcccctcggccactgggacgtggacagcaggcacttccccgccatgaactac
accaccaagggccccaccttactgtga
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