Lates calcarifer (barramundi perch): 108875246
Help
Entry
108875246 CDS
T04895
Symbol
mef2aa
Name
(RefSeq) myocyte enhancer factor 2aa isoform X5
KO
K09260
MADS-box transcription enhancer factor 2A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108875246 (mef2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108875246 (mef2aa)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
108875246 (mef2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
108875246
NCBI-ProteinID:
XP_018519535
LinkDB
All DBs
Position
LG10:complement(13612160..13698776)
Genome browser
AA seq
471 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDASYVLTPHTEEKYKKINE
EFDNMMRNHKIPTALPQQNFSMHVAVPVSNPNAMYQPGGSLGSQSLAAATASLSDSGMLS
PPQASLHRNVGSSGGPQRPTSAGSAGNGFVNPRGSPGLLSTPSGNGLGKVMPTKSPPPPG
GNLGMGSRKPDLRVVIPPSSKGMMPPLSEEEEMDLNTQRISSSQSTQPLATPVVSVTTPS
LPPQGLVYSGMPTSYNPAEYSLSSAEISSLQGFGSPGLSLGSMSAWQQHQLGQAALNSLV
GGGHLPQGSNLSISTSQSINIKSEPISPPRERVTPSGFPPQQPQQGSSRQEVLGRSPADS
LSSSCSSYDGSDREDHRPDFHSPLGLGRPPAGSEDRESPSVKRLRMDTWVT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggggcggaagaagatacagatcaccaggatcatggatgagaggaacaggcaggttacc
ttcacaaagaggaagtttggcttgatgaaaaaggcctatgagctgagtgtactatgtgac
tgtgagatagccctcatcattttcaacagctctaacaaactgttccagtacgccagcaca
gacatggacaaagtgttgctgaaatacacagagtacaatgagccccatgagagcagaacc
aactctgacattgtagaggcgctaaacaagaaagaacacagaggttgtgatagcccggac
cctgatgcctcatatgtcctcactcctcacacagaagaaaagtataaaaaaattaatgag
gagtttgataatatgatgagaaatcataaaatccccacagcattgcctcagcagaacttc
tccatgcatgtggcagtgcctgtatccaatcctaatgccatgtaccagccaggagggtct
ctgggcagccagtccctggcagcagccacagcctctctgagtgatagtgggatgctgtcc
cctccgcaagcctctctgcacaggaatgtgggctccagtggaggcccccagaggcccacc
agtgcaggaagtgcagggaatggtttcgttaaccccaggggctctccgggcctcctcagt
acacccagcggcaatggcctgggtaaagtcatgcccaccaagtctccaccaccccctgga
gggaacttgggaatgggaagccgcaagccagacctaagggttgttatccctccgtcgagc
aaagggatgatgcccccgctgtcggaggaggaggaaatggatttgaacacccagaggata
agcagctctcagtccacccagcccctggccactccagtagtgtctgtcaccacccccagc
ttacccccacagggcctggtctactcaggcatgcccacctcctacaaccctgctgagtac
tccctgagcagtgcagagatctcttccctacagggcttcggctctcctgggctctcactg
ggctccatgtcggcatggcaacagcatcaactgggccaggcagctcttaattctttggtt
ggtggaggtcacctacctcagggctccaacctatccatcagcaccagccagagcataaac
ataaagtccgagcccatctcgccgccacgggagcgtgtcaccccgtctggcttcccccct
cagcagccgcagcaagggtccagccgacaggaagtgctgggacgctcgcccgccgacagc
ctcagctcctcctgtagctcgtatgacggcagcgatcgcgaagaccaccggcccgacttc
cactccccgctggggctgggcagaccccccgctggctctgaggacagggagagcccctcg
gtcaagcgcttgcgcatggacacatgggtgacataa
DBGET
integrated database retrieval system
