Lates calcarifer (barramundi perch): 108875875
Help
Entry
108875875 CDS
T04895
Symbol
rbfox2
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108875875 (rbfox2)
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108875875 (rbfox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
108875875
NCBI-ProteinID:
XP_018520565
UniProt:
A0A4W6FXA7
LinkDB
All DBs
Position
LG5:complement(16416168..16451373)
Genome browser
AA seq
456 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLMDRDRELDTMAGVHPNPGGAPAAVRGMKRGDPEPDGQTAAAL
VDSAGAECKRPRIDGSGGIGEVGQNNDPLTLGYHGYPSHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGGSLYAAGAVQGPVEAGGAANSAANAASSLSAQQSDGSSQIDG
QSGVGSGGGGGGGSVGDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFESSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGL
ATLPYAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAASTAATFRGAHLRGRARPIYSAVR
AAVPQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPAAVATPAAAAAAAAAYSDSYG
RVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatcaatcatgctgcctgtgtcccggggtctcatggac
cgggatagagagctggacaccatggccggggtgcatccaaacccgggcggcgctcctgca
gctgtccggggcatgaagcgcggagaccccgagcctgacggtcagacagcggcggctctg
gtggactcggctggggcggagtgcaagcgtccccggatcgacggctcaggaggaatcggc
gaggttggtcagaataacgaccctttgacccttggttaccatggctacccatctcatagt
cagggctctcaggatagtgctggcggtcaggagggacttgtacccccacctttctccgcg
ttccctccacctccaccgccgcccccccagaacggcttggccctggattacgggggcagc
ctgtatgcagcgggggccgtccagggccccgtggaagccggcggagcagcgaacagcgcc
gccaacgccgccagcagcctcagtgcccaacagtcagatgggtcctcccagattgacggg
cagtcaggggtcggctcgggaggagggggtggcggggggagcgtcggggatgattcagat
gccaaggggacccccaaacgcctccacgtatccaacatccccttccgcttccgagaccct
gacctacggcagatgtttgggcaatttggcaaaatcctcgatgtcgagatcattttcaat
gagagggggtccaagggcttcggttttgtaacattcgagtcaagtgcagacgcagagagg
gccagagagaagcttcatggtacactggtggaaggacgtaaaatcgaggtcaataatgcc
acagccagagtgatgacgaacaagaagatgacgacaccgtactctaacggagagggcctc
gctactcttccatatgctggatggaagttgagtcccatggtcggagcgatgtacagtcct
gagctttacacagtaccagggtttccatacccagcagcagcagcagctgcttccactgct
gcgacctttcgaggcgctcatctccggggtcgtgcccggcccatctacagtgcagtcagg
gcagctgtgccacaacctgccatccctacataccctggtgtgatggcctatcaggatggt
ttttacggtgcggccgatctctacggtggctatgcagcgtatcgttacgcccagccagct
gcggtagcgactcctgcggcagcagcggctgcagcagcagcttacagtgacagctatgga
cgagtttacacagcagacccctaccatgctgcactcgccccagctgcctatggtgttgga
gccatggccacactgtacaggggaggctacagtagatttgccccttactaa
DBGET
integrated database retrieval system
