Lates calcarifer (barramundi perch): 108876020
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Entry
108876020 CDS
T04895
Symbol
stard13b
Name
(RefSeq) stAR-related lipid transfer protein 13 isoform X1
KO
K20632
deleted in liver cancer protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108876020 (stard13b)
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108876020 (stard13b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
Tra1_central
SAM_1
Motif
Other DBs
NCBI-GeneID:
108876020
NCBI-ProteinID:
XP_018520790
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All DBs
Position
LG21:17975800..18025999
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AA seq
1112 aa
AA seq
DB search
MFRELQESTGSECLGSMTPETQDIYLRMDHHRRRSGYRLGRIIARQQLLKKIAGEIEAKE
ACDWLRAAGFPQYAQLFEDSQFPIDITPVKRDHDFLDKDLVEPLCRRLNTLNKCASMKLD
VNLPKKKSEDSDEEDLFAISDKWTFEWSSRRWSRLQDIDCLLGNHREGQHSRDGVPLRNT
TSSESVLTDLSEPEVSSLHSESSGGSGHRGLSTEDSDCSNRTCSDSAAMPDSTSLTMPHI
PKEIAHYGSLPDKHGKTSRTRAKDFLKRMETLRSRGTLGRSRKTLVISSPVLQQEAQALK
TLHCVEIINGDGGAPEPLSNKVLLSQCSSEGSSHSSGSAVSTPSLKERKPHRADYKRSGM
YLEDIDIFSGTQVNKVAEENRRNEFCSYEDLVVHIPKDHKPGTFPKALSIESLSPTNGAS
INWHTGSMHLESPLISTRRESRPVTQCCSRGSRISVYDNVPGSHLYASTGDLIDLEKEDL
FPHLDDILSHVNGLQQIVDHWSKNVLPGGEGMSQMDGEREDTVGLQSSSQITLDFEGNSV
TESQTTPSDGDRDRVSLAETESARLRERRDSGVGASLTRPNRLRWPSFQISNRLSHSVAS
LQITNQSAGQLSLLQKFSLLRLTAIMEKYSMSNKHGWTWSVPKFMKRMKVPDYKDKIVFG
VPLIVHVQRSGQPLPLGLQQALRYLRSQCLDQVGLFRKSGVKSRIQALRQMNESSPDNVN
YEDQSAYDVADMVKQFFRDLPEPLLTSKLGETFLHIYQYVPKDQRLQAVQAAIMLMSDEN
REVLQTLLCFLSDVTSSVEENQMTPMNIAVCLAPSLFHLNILKKDNLSPRAMQKKYATGR
PDQKDLNENLAATQGLAHMIIECNRLFEIPHEMVTQSRNSYVEADLHAPTIDELCKQLED
DDGTYQTHMEGRLQNLLKEAREKSKYWVSCSSSDNTELYYKKVGDGNPLRRWRVSVEVEA
PPSVVLNRVLRERHLWDVDLLQWKVSETLDKQTEVFQYVLNRMPPHPSRDFVVLRSWRTD
LPKGACSLVSVSIEHEDCPPVGGVRAIVLESNYLLEPCGSGKSRLTHICRVDLKGRTPDW
YNKAFGHLCAAEAARIRNSFQPLITDGPETKI
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgggagctccaggagtccacaggaagcgagtgtctggggagtatgactccagag
actcaggatatctacctgagaatggaccatcaccgcagacgctcagggtacaggctgggc
aggatcattgccaggcagcaactactcaagaagattgctggagaaattgaagcgaaagag
gcgtgtgactggctgagggcagcaggatttccccagtatgctcagctctttgaagattcc
caattccccattgacattactcctgtgaaaagagatcacgattttctggacaaagatctt
gtggaacctctttgcaggcgactcaacaccctgaacaagtgtgcctctatgaaacttgac
gtgaaccttccgaaaaagaaaagtgaagactctgatgaagaagacctgttcgctatcagt
gacaaatggacctttgagtggagcagccggcgttggtccaggttacaggacattgactgt
ctgctgggaaaccacagagagggtcagcactccagggacggcgtgcctcttagaaacacc
accagcagtgagagtgttctgacggacctcagtgagccagaggtctcttctttgcacagt
gagagcagcgggggcagcggtcacaggggcctcagcacagaagactctgactgctccaac
cgcacctgttcggattctgcagcaatgccagactccacttctctcacaatgcctcacatc
cccaaagaaattgctcactacggctcactacctgacaagcatgggaagacaagtcgcacc
cgtgccaaagacttcctgaagcgcatggagaccctgcgctcccgaggaactctaggaagg
agccgtaagacattagtcatcagctctcccgtgctgcagcaggaggcccaggccctgaag
acactgcattgtgttgagatcataaatggagatggtggggctccagaaccactgtccaac
aaagttcttctgtcccagtgtagtagtgagggtagcagccattctagtggcagtgctgtc
agcacacccagcttaaaagagcgtaagcctcatagggctgactacaagcgcagtggtatg
tatttagaggacatagacatcttctcaggtactcaagtgaataaagttgcagaggaaaac
cgtaggaatgaattctgctcctatgaagacctggtggtccacatccctaaagaccacaag
ccaggaaccttccctaaagcactgtccatagaaagcttgtctccaaccaatggggcctct
attaactggcacactggcagcatgcacctggaatccccactaatttccaccagaagggaa
tccaggcccgtcacccaatgctgttctagaggtagccgcatcagtgtgtacgataatgtt
cctggctcacatttgtatgccagcactggagacctgatagacctggagaaagaggacctg
tttcctcacctggacgatatcttgtcgcatgtcaatggtctacagcagatagttgaccac
tggtctaagaatgtgttgcctggaggagaagggatgtcgcaaatggatggtgagagggaa
gataccgtagggctccagtcttctagtcagatcacattggactttgagggaaattcagtc
acagaaagccagaccacaccgagtgatggggacagagacagggtctcacttgctgagaca
gaatctgcaaggctcagggaacggagagactcaggagtcggtgcttcactcacacgacca
aatcggttacgatggcccagctttcagatatcaaatcgtctaagtcactcagtggcatcc
ctgcagattaccaaccaatcagcaggccagctgagtttgttgcagaagttttctttgctg
cgtcttactgcaatcatggagaagtactccatgtccaacaagcatggctggacttggtct
gtgccgaagtttatgaagagaatgaaggtaccagactataaggataagattgtgttcgga
gtgcctctcatagtgcatgtgcagcgttctggacaacccctgccccttggcctgcagcag
gccctgcggtatctgaggagccagtgtcttgaccaggtgggtctgtttcgtaaatcaggg
gtgaagtctcgaattcaagcccttaggcaaatgaatgagagttctccagacaatgtgaac
tatgaggatcagtctgcctatgatgtggctgacatggtgaagcagttcttcagggattta
cctgagcctctgctcaccagcaaacttggggagaccttcctccatatttaccaatatgtg
ccaaaagaccaaaggttgcaggccgtccaggcagccatcatgttgatgtcggatgaaaac
cgggaggtgctgcagacgctgctctgtttcctcagcgatgtcacttcttctgtggaggag
aaccagatgacacccatgaacattgctgtgtgtctggctccctcccttttccatctcaac
attctcaagaaagacaatctctcaccaagggccatgcagaagaagtatgccactggcaga
ccagaccagaaggatctgaatgaaaatttagcagctactcagggccttgctcacatgatc
atagagtgcaaccgtctctttgagatcccccatgagatggttactcagtcgcgtaattca
tacgtggaggctgacttgcatgcaccaacaattgacgagctgtgtaagcagctggaggat
gatgatggaacataccaaacacatatggaggggagactacagaacctgctcaaagaggcc
cgggaaaagtccaaatactgggtgtcatgcagcagctctgataacacagagctctactat
aagaaggtgggagatgggaaccctttaagacgctggagagtatctgtggaggtggaagcg
ccaccatctgtagtgttgaaccgggtgctgcgagagcgccacttgtgggatgtggacctg
ctacagtggaaagtgtctgagacactagacaagcagacagaggtgtttcagtatgtgctc
aatcgcatgccccctcatcccagcagggactttgttgttctcaggtcatggaggacagac
ttgcccaaaggtgcatgctccctggtttctgtgtctattgaacatgaggattgtcctcct
gttggaggagtacgagctattgtcctcgagtccaactacctgctagagccctgtggctct
ggaaagtccagactaactcatatctgcagagtggacttaaaaggaaggactccagattgg
tataacaaagccttcggtcacctttgtgctgcagaagctgcccggatccgcaactccttt
cagccactaatcacagatggcccagagaccaaaatctga
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