Lates calcarifer (barramundi perch): 108876151
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Entry
108876151 CDS
T04895
Name
(RefSeq) C-X-C chemokine receptor type 5
KO
K04190
C-X-C chemokine receptor type 5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108876151
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108876151
04050 Cytokine receptors [BR:
lcf04050
]
108876151
04090 CD molecules [BR:
lcf04090
]
108876151
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Chemokine
CXC Chemokine
108876151
Cytokine receptors [BR:
lcf04050
]
Chemokine receptors
CXC Chemokine
108876151
CD molecules [BR:
lcf04090
]
Proteins
108876151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108876151
NCBI-ProteinID:
XP_018521008
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All DBs
Position
LG21:20232831..20235945
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AA seq
362 aa
AA seq
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MALTLTFTTTQWSSEGENATAYEDYYQNVTDGMVFICEEDGLGLQTFDAVLYSFIFLLGV
VGNTLMITVLLRRRRLLRITEIYLLHLALADLMLLLTFPFSVVNSVSGWLFGEFLCKLMG
LMKNLNFLCGSFLLACIGFDRYLAIVHAIPSMRSRRPRAVHLTCISLWLVCLGLSVPNVV
FLTVMQDSSRLSCYYYLHSIHGHNWVLARRVLDHVCFFLPLAIMSYCYTAVVVTLCNSQK
SQAKQGAIRLALVVTLVFCFCWLPYNITLLIKTMVDLDVISIESCESEDLLKAALDVTES
LGFSHCCLNPFLYAFVGVQFRNELYQLLCELGCSPVCLRFIRAQGHSRPSISEGATTIST
TM
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggctctaacactcacttttacaactactcagtggtcatctgaaggggagaatgccaca
gcctatgaagactactaccagaacgtgacagatggaatggtcttcatttgtgaagaagat
ggcctaggcctgcagacctttgacgctgtgctttacagtttcatctttctgctgggagtg
gttgggaacacgctgatgataacagtcctcctgagacgtcggcgcctcctccgcatcaca
gagatctacctgctgcaccttgccttggccgacctcatgctcctgttaacatttcctttc
agtgtggttaacagtgtctctggctggctgtttggggagtttctctgcaagctgatgggc
ctgatgaaaaatcttaacttcctctgtgggagtttccttctagcttgcattgggtttgat
cggtatttggctattgttcatgctattcctagtatgcgaagtcgacgtccgagagcagtg
catcttacatgtatttcactatggctggtctgtttgggtttatcagtacccaatgttgtg
tttcttaccgtgatgcaagactcatctaggctgtcctgttactattatctccattctatc
catgggcacaactgggttttggccagaagagtcttagatcatgtttgctttttcctacct
ctggctatcatgagctactgctacacagcagtggtagttactttatgcaacagtcagaaa
agccaagcaaaacaaggagccattcgactggctttagttgtcactctcgtcttttgcttc
tgctggcttccatataatatcaccttattgataaaaactatggtagacctggacgttatc
tcaattgaaagctgtgaatcagaagacctgctgaaagcagcccttgatgtgacagagagc
ctgggtttctcacactgttgcctcaaccctttcctgtatgcatttgttggggtgcagttt
cgcaatgagttgtatcagttactttgtgaactgggctgcagccctgtttgtctacgtttc
atcagagctcagggtcacagtcgaccatccatttctgaaggagcaacaaccatcagcaca
acaatgtaa
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