Lates calcarifer (barramundi perch): 108876402
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Entry
108876402 CDS
T04895
Symbol
rerea
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108876402 (rerea)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108876402 (rerea)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
ELM2
GATA
CCDC47
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
108876402
NCBI-ProteinID:
XP_018521395
LinkDB
All DBs
Position
LG6:complement(11732478..11854812)
Genome browser
AA seq
1548 aa
AA seq
DB search
MTADKEKEREKERDRDRDRDRDKREAGKSRRQDGDRGDRESESSRPRRSCTLEGGAKNYA
ESEHSEDEDNDNGSTGGGSGTAEEAGKKGKKKTPKKKSRYERTENGEITSFITEDDVVYR
PGDCVYIESRRPNTPYFICSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRNNE
NDSGRELVITDPVVRSRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARIDSFFY
ILGYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSPGGQAVTENEELVWMPGVNDCDLL
MYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESSYDAGKALQRLVKKPV
PKLIEKCWSEDEVKRFIKGLRQFGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASCR
AHRRHRRQPVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACR
HCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEEDGLSG
KHSMRTRRNRGSMSTLRSGRKKQTASPDGRASPTNEDLRSSGRTSPSAASTDSTDSKTDS
MKKPSKKIKEEAPSPMKSAKRQREKGASDTEEPERASAKKSKTQELSRPDSPSECEGEGE
GEGESSDGRSINEELSSDPKDIDQDNRSSSPSIPSPRDNESDSDSSAQQQQHLQSQHPAV
IQCQPGTSAASSAPPPPTTSAPSLPPQVSPTAASTSLPPQPLPQASPMSLIQSGASLHPQ
RLPSPHSPLTQAPPPGPSVPPQSLPSSHHGPMPPMPHPLQPGPSHLPHPHSMPPQGFPVG
QSQVPPPPISGQSQQRPHTPPSQSQSSAQSGGQPPREQPLPPAPLSMPHIKPPPTTPIPQ
IPNPQSHKHPPHVSAPPFPQMPSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQGQQLQ
PPPAQPPVLTQSQSLPPSASHQPPPAPPLPPSAVASHPNGPPQPPFSSHPFNTVLPPTGP
PSSSSNSMPGLQPPSSSAPSSSISMPLPASVTCAGPGPALPPVHIKEEPLDESEEPESPP
PPQRSPSPEPTVVNTPSHASQSARFYKYLDRGYNSCARTDFYFTPLASSKLAKKREEALE
KAKREAEQKAREEKEREREREKEREREREREKEAERAAKAPSSSHEGRMGEPQMAGPAHM
RPPFDGPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFFVSLNPADPLLAYH
MPSLYNADPAMRERELREREMREREIRERELRERMKPGFEVKPPEMDTLHPSTNPMEHFA
RHGAITLPPMAGPHPFASFHPGLNPLERERLALAGPQLRPEMSYPERLAAERLHAERMAT
VANDPIARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQAGGGECLVCPPGSGAHPLAVDP
LAAGPHLARFPYPPGAIPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGGLPPPMSAAHQLQ
AMHAQSAELQRLAMEQQWLHGHHHMHGGPLPGQEDYYSRLKKESDKQL
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgacaaagagaaggagagggagaaagagcgggacagagacagagacagggac
cgggacaagagagaggccggtaagtcccgccggcaggatggggaccggggcgaccgcgaa
agcgagagctccaggccccgacgcagctgtacgctggagggcggggccaagaactatgca
gagagcgagcacagcgaggacgaggacaacgacaatggcagcacgggcggaggcagcggc
acggccgaggaggccggcaagaagggcaagaagaagacgcctaagaagaagtcgcgctac
gagcgtacggagaacggagaaataacatccttcatcacagaagacgatgttgtttacaga
cctggagattgtgtgtacattgagagtcggcggcccaacactccctacttcatttgtagc
attcaggatttcaagctgagtaaacgggaccatctgctgatgaatgtgaaatggtactac
cgccagtcagaggtgcccgactctgtctaccagcacctggtgcaggatcgcaacaatgag
aacgactctggccgggagctggttatcacagaccctgtggtccggagtcgagaactcttc
atctctgactatgtggacacttatcatgctgctgctctcagggggaaatgcaacatttcc
catttctccgacatttttgctgccagggagttcaaagcccgcatcgactcctttttctat
atcctcggatataacccagagaccaggcgactaaacagcacacaaggggaaatccgagtg
ggaccgagtcaccaagccaagcttccagagctacagcctttcccctctcctggtggccag
gccgtgaccgaaaatgaagagctggtctggatgccaggggtcaatgactgtgaccttctt
atgtacctcagagccgcaaggagcatggctgcctttgcagggatgtgtgacggaggctca
acagaagatgggtgtctagcagcctctcgagacgacactacattaaacgcacttaacact
cttcatgagagcagctatgatgcaggcaaggctctccagcgcctggttaagaagccagta
cccaaactgatagagaagtgctggtctgaggatgaagtgaagcgcttcattaaagggttg
agacagttcggcaaaaacttcttcaggatccgcaaagagctgctgcccaacaaagaaacg
ggagagctaattaccttctactactattggaagaagacccccgaggcggccagttgtcga
gcccaccgcagacaccgccgtcagcccgtcttccgccgcatcaagacacgaacggcttca
actcctgtcaacactccctcacgccccccctccagcgagtttttggacctcagctcagcc
agcgaagatgactttgacagtgaagacagcgaacaggagctgaagggctacgcctgccgc
cactgtttcactaccacctccaaggactggcaccacgggggccgggagaacatcttgctg
tgcacagactgccgcattcacttcaagaagtacggtgagctgccccccatcgagaagcct
gtggacccgccaccatttatgttcaaacctgtcaaagaggaagaggatggactcagcggg
aagcatagcatgaggacccgacggaaccgaggctcgatgtcaacgctacgtagtggtcgc
aagaagcagacagccagtcctgatggccgagcctcgcctaccaacgaggatttgcgctcc
agcggacgtacctcacccagcgcggcaagtactgatagcactgacagcaagacagactcc
atgaagaagccaagcaagaagatcaaagaagaggctccttcacctatgaagagtgccaaa
cggcaacgagagaagggagcttcagacacagaggagccagagagggccagtgccaaaaag
tccaagacacaagagctgagtcggccagactcgccctcagagtgcgagggggaaggggag
ggcgagggcgagagctctgatgggcgcagcatcaatgaggagctcagcagcgatcctaaa
gacattgaccaggataaccggagctcctccccgagcatccccagcccccgtgacaatgag
agcgactcagactcctctgcccagcagcagcagcacctgcagagccagcatcctgcagtc
atccagtgtcagccaggcacctcagcggcctcctcggcacctcctccgcctacgacctca
gccccttcactgcccccgcaggtctcccccacagcggcttccacgtctctacctccccag
cctctgccccaggctagcccgatgtctcttatccagtcaggagcgtccctccaccctcaa
aggcttccctctccacattcacctctgactcaggctccgcctcctggcccttcagtccca
cctcagtcattacccagctcgcatcatgggcctatgcctcccatgccacatccactgcag
cctggcccttcacacttgcctcaccctcactccatgccccctcagggcttccctgtgggt
cagtctcaggtccctcccccaccaatctctggccaatcacagcagaggcctcacacacct
ccatcccagtcccagtcatctgctcagagtggaggccagcctcccagagagcagcccctg
ccgcctgccccattgtccatgcctcatatcaagcccccgccaaccacacccatccctcag
atacccaacccgcagtcccacaaacacccaccccacgtatctgcgcctccatttcctcag
atgccttcaaatctgcctccacctcctgccctcaagcccctcagctctttatccacccac
caccctccatcggcacacccgcctccccttcagctcatgcctcaggggcagcagcttcag
cctcccccagcccagcctccagttctcacccagtcccagagcctcccgccatcagccagc
caccagcctcctccagcccctccactgccgccctccgcagtggcctcacaccccaacggg
ccaccacagccgccattctcgtcccatcctttcaatacagttctacctccgaccggccct
ccctcatcgtcatcaaactctatgcctggcttacagcctccatcttcctctgctccatcc
tcttccatctccatgccgctccccgcctcagtcacttgtgccggcccgggccctgcactt
ccgccagtacacatcaaagaggagcctttggacgagtcagaagagccggagagcccccca
cccccacagagaagcccctccccagagcctactgtcgtcaatacacccagccatgccagc
cagtcagcacggttctacaagtacctggaccgaggttacaactcgtgcgctaggacagat
ttctacttcactcccctggcttcatccaaactggccaagaaacgagaggaagctctggag
aaagccaagagggaagcagaacagaaagcgagggaggagaaggagagagagagggagagg
gaaaaagagcgagaaagagagcgggaacgagaaaaggaagccgagcgagctgcgaaagca
cccagttcctctcacgaaggcagaatgggtgagcctcagatggccggccccgcccacatg
cgtccacccttcgacggcccgcccactacgatcgcagctgtgcctccatacattggcccc
gacacccctgccctacgcaccctcagcgagtatgcccgaccccacgtcatgtcccccacc
aatcgaaaccaccccttctttgtgtccctcaaccccgcagacccactgctggcctatcac
atgcccagcttgtacaacgccgacccggccatgcgggagcgtgagctgcgagagcgggag
atgcgtgagagggagattcgcgagagggagctgagggaaaggatgaaacctggttttgag
gttaagcctccggagatggacacgcttcacccctctacaaaccccatggagcactttgcc
cggcatggggccatcacgttgccccccatggccggccctcaccctttcgcctcgttccat
ccaggcttgaacccattagagcgtgagcggctggccctcgctgggccccagctgcggcca
gaaatgagctacccagagaggttggctgcagagagactccatgctgagaggatggccaca
gtggccaatgaccccatcgcccgtctgcagatgttcaatgttacgccgcaccaccaccag
cactcacatatccactcccatctccacctccaccagcaagatccccttcaccaagcaggt
ggtggtgaatgtcttgtgtgtcctccaggttccggggcccatccactggcagtagatccc
ctggcagctggacctcacctggcccgcttcccttacccgcccggcgccatccccaaccct
ctcctgggccagccgcctcacgaacacgagatgctgcgccacccagtcttcggtactcca
tacccacgggacctaccaggaggtctgccaccgcccatgtccgcagctcaccagctgcag
gccatgcatgcccagtcagctgagctccagaggctggccatggagcagcagtggctccac
ggacaccatcacatgcacggaggaccactgcctggccaggaggactactacagccggctg
aagaaagagagtgacaagcagctgtaa
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integrated database retrieval system
