Lates calcarifer (barramundi perch): 108877095
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Entry
108877095 CDS
T04895
Name
(RefSeq) tryptophan--tRNA ligase, mitochondrial
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108877095
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108877095
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108877095
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
108877095
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108877095
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108877095
Prokaryotic type
108877095
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF4164
Motif
Other DBs
NCBI-GeneID:
108877095
NCBI-ProteinID:
XP_018522539
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All DBs
Position
LG1:4520840..4546453
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AA seq
371 aa
AA seq
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MTTQRKMALPVRTNLRHVFRFIEKFNSPKRFLCLGACPENKEHAGGRRIFSGIQPTGVPH
LGNYLGALENWVALQNQYPSVLYSIVDLHSITQPQDPTQLRSNILDMAASLLACGIDPER
AILFQQSKVSEHAELSWILGCLTSMPRLRHLPQWKMKSKQKNEGSVGLYTYPVLQAADIL
LYKSTHVPVGEDQVQHLELAQDLARIFNHHYGDLFPGPCALLSSTRKVKSLRDPSAKMSK
SDPQTMATITITDSPDDIALKVRRAVTDFTSEVTFDPETRPGVSNLVTIHAAMAMISVEE
AVSQARGLDTGAYKKLVTEAVIQRLTPIREEIERLRSDRAHLERVLAQGNSRARELASPV
LREVRQRVGFC
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacaacgaaagatggcgctccccgtgcggactaacttgagacatgtcttcagg
ttcattgagaaatttaattcgcctaaaaggttcctctgccttggagcctgtccggaaaac
aaggagcatgcaggaggacggcgcatattttctgggatccagccaactggggttccccac
ctgggcaactacctgggtgccctggagaactgggtggccctgcaaaaccagtatccatca
gtgctctacagcattgtggacctgcactccatcacccagcctcaggacccgacccagctc
aggagcaacatactggacatggcagccagcctgctggcctgcggcatcgacccagagagg
gcaatactcttccagcagtctaaggtgtctgagcacgctgagctctcctggatcctcggc
tgtctgaccagcatgccccgcctccgacacctgccacagtggaagatgaagagcaaacaa
aagaatgaaggcagtgttggtctctacacgtatcctgtcctccaggctgccgatattctt
ctttacaagtccactcacgtccccgtcggagaggatcaggtccagcatttggagctggct
caggatctcgctcgcatcttcaaccaccactatggagacctgttccctggaccctgcgcc
ctgctgagctcaacacggaaggtcaaatccctccgtgacccctccgctaaaatgtccaag
tccgacccccaaaccatggcgacgattaccatcacagactctcctgatgacatcgccctc
aaggtccgccgtgctgtcaccgacttcacctccgaggtcacctttgacccagagacacgt
cctggagtgtccaacctggtgacgattcacgccgctatggcgatgatcagcgtggaggaa
gctgtgtcccaggccagagggttggacacgggagcctacaagaagcttgtgactgaggcc
gtgatccagaggttaacacctattagagaggagatcgagaggctgaggtcggaccgggct
cacctggagagagtgctggctcaggggaacagcagggctcgggaactggcttcaccggtg
ctcagagaggtccgacagcgagtgggattctgctga
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