Lates calcarifer (barramundi perch): 108880312
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Entry
108880312 CDS
T04895
Symbol
cntfr
Name
(RefSeq) ciliary neurotrophic factor receptor subunit alpha isoform X1
KO
K05059
ciliary neurotrophic factor receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108880312 (cntfr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcf04050
]
108880312 (cntfr)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108880312 (cntfr)
Cytokine receptors [BR:
lcf04050
]
Interleukin receptor families
IL6/12 receptor family
108880312 (cntfr)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Receptors
108880312 (cntfr)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
Ig_2
I-set
ig
Ig_5
Motif
Other DBs
NCBI-GeneID:
108880312
NCBI-ProteinID:
XP_018527288
UniProt:
A0A4W6C8E5
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Position
LG9:complement(5854751..6062552)
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AA seq
362 aa
AA seq
DB search
MANLVTSLCCVVLAAVVVAYAQRRSQLVARNQYERMGSDVTMQCGSLDNDASVSWKVNGT
DVKAQHRLEGPRLILTQVNLGHNGLYSCFQNPHGERRDTIILHIGIPPREPTVTCRSNTY
PKGFYCSWHQLYSTYIPTTFEVDVQHNQRSLEVQKDSVHKNRCHVRFPEVFSSFPYKVNV
TAVNALGKASTTITFEESTIVKPDPPERVTATPIRFNPRRLEVSWHSPATWPDIDNFPLK
YFLRYRPLIRDQWQHVELSDSTSHTITDAYAGKEYIIQVAAKDTEIGTWSDWSVAVHATP
WIEDPLPIASTTEDSSTLLTETKTSPIPSSNAPQKAEPPVGRAAKLLTFFSPLLLGMLLL
LM
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccttgtgacatcgttgtgctgtgtagttctggctgcggtggtggtagcctac
gctcagagacgcagccagcttgttgctaggaaccagtatgagcgaatgggcagtgatgtt
accatgcagtgcggctccctggacaatgatgcatcagtgtcatggaaggtgaatgggacg
gatgtaaaagcccaacaccgtctagaaggtcccagactgatcctgacccaagtgaacctg
ggccacaacggactctacagctgctttcagaacccacatggagagaggcgtgacaccatc
atcctccacatcggcattccccctcgggagcccacagtcacttgtcgatccaacacctac
cctaaaggcttctactgcagctggcaccagctgtactcgacatacatccccactaccttt
gaagtggacgtacaacataaccagcgttctctggaggtgcagaaagactctgtccacaag
aaccgctgtcatgtacggtttcctgaggtcttctccagcttcccttacaaagttaacgtg
acggcagtcaacgccttgggaaaagcttctaccaccatcacttttgaggagtccactata
gtcaaaccagaccccccggagcgcgtgacggcgaccccgatccgtttcaaccctcggagg
ctagaggtatcctggcacagccctgccacctggcctgacatcgacaacttccctctgaaa
tacttccttcggtaccgaccactcatccgagaccagtggcagcatgtggagctatctgac
agcacctcccacaccatcaccgatgcctatgctgggaaggaatacatcatccaggtggct
gccaaggacacagagattggaacatggagtgactggagtgttgctgtccatgccacaccc
tggattgaggatcctctgccgatcgcctccacaaccgaagattcttctactcttctaacc
gagactaagacctcccccataccgtcctccaacgcaccacaaaaggctgaacctccagtg
ggcagagctgccaagctcctcacatttttctctcctttgctgttaggaatgctgctgctg
ttgatgtga
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