Lates calcarifer (barramundi perch): 108880635
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Entry
108880635 CDS
T04895
Symbol
zgc:195001
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108880635 (zgc:195001)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108880635 (zgc:195001)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
NLBH
Motif
Other DBs
NCBI-GeneID:
108880635
NCBI-ProteinID:
XP_018527741
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All DBs
Position
LG11:complement(2979198..2986314)
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AA seq
262 aa
AA seq
DB search
MHIPSSPTHLEVNKRDPPEAHRHCDHKTSPRLMPNRATSTKGIMPVPKKAGGKNGAAAAQ
EKLPPYEPNIPEPTTRADFMKYWLPLSLDDKTAQKLLWISEAGSKVARTSDAVCPYPNRP
ERYEHSPQVLTKEGLLGHRGYWEVDYDGWVVIGVVCESAPRKGQDGPCGLGENNTSWGAG
WSGSCYQVWHNSENVDIQLPLSPTMGVYVDQPAGIIKFLLVEGEGEKEVRLIHKFKANVQ
EKLFPGFWVGTNSFCLIRKKDQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcacattccctcctcccccactcatttggaagttaataagagggaccctccagaggcg
cacaggcactgcgatcacaagacctccccccgtttgatgccaaacagagccacgagcacc
aagggaatcatgcctgtgcccaagaaagcaggaggaaaaaacggagctgctgctgcacaa
gaaaagctgccgccatatgagccaaacatccctgagccgaccaccagggctgacttcatg
aaatactggctcccgctctctctggatgataaaactgcacagaagctgttgtggatttca
gaggccgggtctaaagtggctcgtacgtctgatgcagtctgcccgtatccaaacaggcct
gagagatacgagcactcaccacaggtgctgactaaagagggtctgctgggccaccggggg
tactgggaggtggactacgacggctgggtggtgatcggggtggtctgcgagagcgcgccc
cgcaaaggccaggacggtccctgcggcctcggggagaacaacacctcctggggcgccggc
tggtctggctcctgctaccaggtctggcacaacagcgagaacgtggacatccagctcccc
ctgtcgcccaccatgggcgtctacgtcgaccagcccgccggcatcatcaagttcctcctg
gtggagggggagggcgagaaggaggtgcggctgattcacaagttcaaggccaacgtccag
gagaagcttttccccgggttctgggtcggcacgaattccttctgccttattcggaaaaag
gatcagtga
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