Lates calcarifer (barramundi perch): 108884325 Help Entry 108884325         CDS       T04895                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf03030   DNA replication lcf03410   Base excision repair lcf03420   Nucleotide excision repair lcf03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lcf00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     108884325    03410 Base excision repair     108884325    03420 Nucleotide excision repair     108884325    03430 Mismatch repair     108884325  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lcf03032]     108884325    03400 DNA repair and recombination proteins [BR:lcf03400]     108884325 Enzymes [BR:lcf01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      108884325     6.5.1.6  DNA ligase (ATP or NAD+)      108884325     6.5.1.7  DNA ligase (ATP, ADP or GTP)      108884325 DNA replication proteins [BR:lcf03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     108884325  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      108884325 DNA repair and recombination proteins [BR:lcf03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      108884325    NER (nucleotide excision repair)     Other NER factors      108884325    MMR (mismatch excision repair)     Other MMR factors      108884325 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  108884325 NCBI-ProteinID:  XP_018533688 UniProt:  A0A4W6C344 LinkDB All DBs Position LG4:4669464..4714855 Genome browser AA seq 1015 aa AA seqDB search MQRSIASFFQPKSKDKDIQKKATDEPVKKPVKSPLKVQNGVQEADSPIKKVTKRSRQILD SDDDEAPVVKEQVAAKGQGDKEAPSKTEKKDDVFKAVPTPLSPPPAPTTPVTPATPATPA TPASSASPGTPSTPNSISPSGIVKRKTARKMFPKRKLDETRSGSESQKDEAEAKEEQGQQ NKRPRVETSASSAGNTGEPMEEGAKEEEVEKAVTEANSPDEEEENEKKEEGEEAKEEERE ERKSSDEREKKAEGAEKKNEAKEKMDDEKGPAVAKKEVVEKDTREGEESPKSQTVKKQKE AKEQKDKEPAKKAPISSFFAPRKAAVKTEKPEKNDEEKKTSTERKSSAEESKDTKGDSTS GQTDYDPSRPGYHPIDHACWKQGQKVPYLAVARTFEKIEEDSGRLRNIETLSNLLRSVLL LSPDDLLCCVYLCLNQLGPAYLGMELGVGETVLMKAVAQATGRQLDKIKAEAQEKGDLGL VAESSRSNQRMMFQPASLTAGGVFRKLKEIASMSGNSAMNKKIDIIKGLFVACRFSEARY IVRSLAGKLRIGLAEQSVLSALSQAVCLTPPGQGFPPAVIDAGKGMSAESRRAWIEEKSL ILKQTYCEMPNYDVLIPVLLKEGIDQLPNHCKLTPGVPLRPMLAHPTKGVGEVMKKFDEA AFTCEYKYDGERAQIHILESGEVRIFSRNQEDNTSKYPDIISRIPKVKKDSVVSCVLDSE AVAWDREKKQIQPFQVLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVRQPLCRRRAL LRESFSEVEGEFVFARSIDSDNTDTIAEFLEQSVRDSCEGLMVKTLEKDATYEIAKRSHN WLKLKKDYLEGVGDTVDLCVIGAYLGKGKRTGTYGGFLLACYDDENEEFQSVCKIGTGFK DEDLEQHYKFLKDHILPKPRAYYRFDQSAEPDVWLDAVQVWEVKCADLSLSPVYKAAMGM VDPEKGISLRFPRFLRIRDDKKPEDATTGAQIADLYKKQQQIQNQGEKADPEDYY NT seq 3048 nt NT seq  +upstreamnt  +downstreamnt atgcagcggagcatcgcatccttctttcagcccaagagcaaagacaaggacattcagaag aaagccacagatgaaccagtgaaaaaacctgtcaagagccctctcaaggtgcagaacggt gtccaggaagccgactcgcccatcaagaaggttaccaagcgcagccgtcagatcctggac agcgacgatgacgaggcaccggttgttaaagagcaagtcgccgccaaggggcaaggagac aaagaagctcccagtaaaacagaaaagaaggatgatgtgtttaaggcagttcccaccccc ctgtctccaccaccagccccaaccacccccgtaacaccagccactccagccactccagcc actccggcctcttcagcttcaccggggacccccagcactcctaactccatctccccgtct gggattgttaaacgcaagaccgcgaggaagatgttccccaagaggaagctcgatgagacc aggagcggcagcgagagtcagaaggacgaggccgaggccaaggaggagcagggtcagcaa aataaacgaccccgtgtggagaccagtgccagcagtgcagggaacaccggtgaacccatg gaggagggagcaaaggaagaagaagttgaaaaggcagtgacggaggctaacagcccagat gaggaggaggagaacgagaagaaagaggaaggagaggaggccaaggaggaggagcgggag gagagaaagagctctgatgagagagaaaagaaagctgagggggcggaaaagaaaaatgaa gcaaaggagaagatggatgatgagaaagggcccgccgttgccaagaaggaggtggttgaa aaggacacgcgagagggagaagagagcccaaaaagtcaaacagtgaaaaagcagaaagaa gcaaaagagcagaaagataaggagccggccaagaaagcccccatcagcagtttctttgct cctagaaaagctgcagtgaagacagagaaaccagagaagaatgacgaagagaaaaagacg agtacagagaggaagagttcagcggaggagagcaaagacacaaaaggtgactcaacttca ggacagacagactatgatccgtccagaccaggctatcatcccatagaccacgcctgttgg aagcagggtcagaaagtgccgtacttggcggtggctcgcacctttgagaagattgaagag gactctggcaggctgagaaacatcgagacgctgtcgaacctgcttcgctccgtgctgctg ctctctccagacgacctgctgtgctgtgtgtacctgtgtttgaaccagctgggtcctgcc tacctggggatggagcttggcgttggagagacggtgctgatgaaagctgttgctcaagca accgggcgacaattggacaaaatcaaagcagaggcgcaggagaaaggagatttgggccta gtggccgagagttcccgtagcaaccagcgcatgatgttccaaccggccagtctgacagca gggggcgtgttcaggaaattgaaggaaattgccagcatgagtgggaactcggccatgaat aagaaaatcgacatcatcaaaggcctctttgtggcatgccgcttttccgaggcccgctat atagtcaggtccctcgctgggaagctgaggataggcctggctgagcagagtgtcctatca gcactcagccaggctgtgtgcttgaccccacctggacaaggttttcctcccgctgtgatc gacgcagggaaggggatgagcgctgagagcaggcgggcctggatcgaagagaaaagtctc attctcaaacagacttactgtgagatgcccaattacgacgtcctcatccctgttctgcta aaagaaggcatagaccagctacccaatcactgcaagctcactccaggtgtaccgctgaga cccatgttggcccaccccacgaagggcgtcggcgaggtgatgaagaagtttgacgaggca gcgttcacctgcgagtacaagtacgacggcgagcgtgcgcagattcacatcctggagagc ggtgaggttcgaatattcagccgtaaccaggaggacaacaccagcaaataccccgatatc atctcccgcattcccaaggtgaagaaggactctgtggtatcctgcgtcctggactcagag gctgttgcctgggatcgtgagaagaaacagatccagcccttccaggtcctcaccacccgt aagagaaaggacgtggatgcctcggagatcaaagtgcaagtgtgtgtgtacgcctttgac ctcctctatctcaacggcgagtccctggtgcgacagccgttgtgtcggcgtagggctctg ctgagagaaagcttctcagaggtggagggagagtttgtgttcgcccgatccatcgactcc gacaacaccgacaccatcgccgagttcctggagcagtctgtccgagattcctgtgagggc ctgatggtgaagacgctggagaaggatgccacctatgaaattgccaagcgctctcataac tggctcaagctgaagaaggactacctggagggggtgggtgacacggtggacctgtgtgtg atcggcgcctacctggggaaaggcaagaggacgggcacctacgggggcttcctgctggcg tgctacgatgacgagaacgaagagttccagtctgtctgcaagatcgggacaggcttcaag gatgaagatctggagcagcattacaagttcttaaaggatcacattctgcccaagccccgt gcctactaccgcttcgaccaatcagcagagcccgacgtgtggctcgacgccgtacaggtt tgggaggtgaagtgcgccgacctgtcgctgtcgccggtctacaaggctgcaatgggaatg gtggatccagagaagggcatttctctgaggttcccgcgcttccttcggatcagagacgac aaaaaaccagaggacgccacgactggagctcagattgctgatttgtacaagaagcagcag cagattcagaatcagggggagaaagctgacccagaggactactactga

DBGET integrated database retrieval system