Lates calcarifer (barramundi perch): 108884631
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Entry
108884631 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: thyroid adenoma-associated protein
KO
K24169
thyroid adenoma-associated protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108884631
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
Armadillo repeat domain-containing proteins
108884631
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2428
Motif
Other DBs
NCBI-GeneID:
108884631
NCBI-ProteinID:
XP_050932608
LinkDB
All DBs
Position
LG16_LG22:23100503..23187104
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AA seq
1926 aa
AA seq
DB search
MVVKKKTAKVEAVALDEEKLQKLIASLSVDGGEDGVKQIAQTLQSCLELTEPVQQIQLVK
KAGSQLEALSEEQSDGALLEACLHTLALVYTSLQAKNPLRRAIASALGSVPAWLQEQTVN
CLCTCLSDCLSSADSDKYPHIVDTIAACLDGFPVGERCINKLLPEVLQFLHKGLNEYLHQ
NSGLAGRHIAQAQLMHSCLAAVKTSMLVVQRSQEAISAALQAEVDQCKVEDTLSSLLSCY
IHILTDEEFIQSVQSTAGMAVVLLIRSVMGSGDEVASVVCSLLCGSVQGLDPAPQWLQQR
CAGLCASGRPPGVSLYLCHGVLAMLSWKGTLPGPQWEQLLLLVPNTLLDLDVSIKESSTA
MVVARVLTLWSGAALDCLQGEGHACPPHLRESLCGGSELQRHLLEHIYSHWEHPLDGVRH
QTRSLFHNLLLLHQHTNPSASDPTKDSYITELTQSLLGLEWHMRGKYGSLGCLVDLCGAE
YLLNIQPQLPSCLLGLMGDQTLAPYASDLLERLFVSHKAQLASEAGAAGKMEDWMERWHQ
TWVTPLLQVLCRARLDQTTYILDYFLPKLLRCSPSSLAHMVQALQDTPPCSTGPSGSRGA
LGALMTCLRAARAQGVVPSSEEGLWGGLVPLPLLQQALINKHDQVRMDALGLVCESHRST
EVLTSQEMGLIRHFLPPNLNSQSPGVRQQTVSLLKKLLCRVKDSTQLLQKRLSQERDQEQ
RDRDKHTLHLYKEFLRWLCSRLLEVLLPGASFSKCLMSLHLLCLLGQLFTFSTGPDVFAL
GEVVTSVHAQNVLYCVASNFLEVKQLASSLLRQLPPSAVGLQEPDRMRCVLQAALDLSTS
TKPFDSVTAAHLLNLLLHQPDLSQALLHCAQQQGLDFQLPSPPTMASDMLILELNTLAVV
QFLLCCLQSEVSRAESSLLQAAASYPLYGRAHCITAVLQHLNTESLTQTEQWRSLVSELI
AVCYRMSDVVSPVVQSSSPEGLIPMDTDSETSAGLQRILQEIQPRDTNDFFTSARQLDTH
HGDDQTQSQTTHTPSLDTGGESYRVTAQMVLVCCWRSMKEVAMLLGQLCQSLPLHYTNDK
AHTRPGLITEEQVEGVGLYFRQQLLQSRHRGAFELAYVGFVRLTDMLCRSGSQSLQQLPA
RWLSEVLDEVKSSDPSSKLCATRRSAGIPFYIQALLSSEPKSSSCSLLKMTMRELITLAM
PSADRNTDSSTVPQVHALNILRALYRDTRLGENIIPFVSDGMQAAVLGFTSPVWAVRNSS
TLLFSTLITRIFGVKKGKDEHSKKNRMTGREFFTRFPALYPFLLNQLEEAAATVESDSGQ
VKLHPSLFLLLLVLSRLYPSPMDGSSSPLGLAPFMSFIIRCSHSAVYRTREMAARALVPF
VLVTQVPSTVQSLLQELPTEPGPRIQHNHIHGTLLQVLFLLRSYQTDSHRPLPAGNGIAG
ALSQRMWLASRQNSCVVTRGAFLDVLVCLCGLKISLLEESEVGELRQQALSVLMASELVI
SEPSSTTLGPGSTQYLLSLARVALSAGVEIPELWRSRQLTSQLLQCLLQCPQYEVRELVL
EGVLRKLQEEEEEKDNEKRRPQWLDETTLSNLTTLALHETHPQCLAKVLQVLCVLISSGE
LLWRDDGKTLSQEEVLLHLFTLAQNSVHSVELHCAALTLVSQLVVQLVNSDPKGASAMSC
LAQWGALVCSCCSEEQPVEVKLMAAKVLVNCTDTLLTSPHLPLGLSTTVSLWGSLFTLLQ
DEDQDVRDSASDFISNVPAPLNMTGVSVCPPVAMDSGMGLLCRLFELWGQVPAGSLALTE
WLLGDEEGSDEAVADEASSLDEEDFLFEKGDLNLWAEPVQWVKLLHGNLSSLILTFKQTQ
CSGTTSQDQAKLQALLTQAQAKALSSQKALDSLPVLPQFSCTVEHARLTLRHQRATLALD
VLERLR
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaagaagaagacagccaaagtagaggctgtggcgttggacgaggagaaactg
cagaagctgatagcgtccctctctgtggatggaggagaagatggagtcaagcagattgct
cagaccctgcagtcctgtttggagctgacagagccagtgcagcagatccagctagttaaa
aaggcagggtcccagttggaagcactgagtgaggagcagtcagatggagctcttctcgag
gcctgtttacacaccctggctctggtctacacgtccctgcaggccaagaaccccctacga
cgagccatcgccagtgccttgggttcagtgccagcctggttacaggagcagactgtaaac
tgtttgtgtacctgcttgtctgactgtctgtcaagtgcagattcagacaaatatccacac
attgtagacaccattgctgcctgtctggatggttttcctgttggtgagagatgcattaac
aaactgctgcctgaagtattgcagtttcttcacaagggactgaacgaataccttcatcag
aacagtggtctagcaggccgtcacattgctcaggctcagctaatgcactcctgcctggct
gcagtgaagacttccatgctggtagtccagagatcccaagaggccatcagtgcagctctg
caggctgaagtcgatcagtgcaaagtggaggacacgttaagcagcctcctgagctgttac
atacacatcctcactgatgaggagttcatccagtcagtccagagtacagccggcatggct
gtagtattactgatcaggtccgtcatgggctcgggagacgaagttgcttctgtggtgtgc
agtttactgtgtggctcagtccagggcttggacccggctcctcagtggctccagcagagg
tgtgctggtctgtgtgccagtggtcgcccgccgggtgtctctctgtatctgtgtcatggg
gttctggctatgttgagctggaagggtactctcccaggaccacagtgggaacaactgctg
ctgttggtcccaaacacactgctggatctggacgtcagtataaaggaatccagtacagcc
atggtggtggctcgggttttgaccctgtggagtggtgctgctctggactgcctgcaggga
gaggggcatgcctgccctccccacctccgggagtccctctgtggaggctctgagctacag
cgacacctcctggagcacatctactcccactgggagcacccactagacggagtccgtcac
caaacccgctcactgttccacaacctcctcctcctccatcaacacaccaacccttccgct
tctgaccccaccaaggactcctacatcacagaactcacccaaagcctgctgggactagag
tggcacatgagggggaagtacggctccttgggttgcttggtggacctctgtggagcggag
tacttgcttaacatccagccccagctgccgtcatgtctcctgggcttgatgggtgatcag
accctggctccttacgccagcgacctgctggagaggctgtttgtcagtcacaaggcgcaa
ctggcaagtgaggctggtgcagcaggaaagatggaggactggatggagcgttggcaccag
acatgggtaaccccgctgctacaggtgctctgccgtgccagactggaccagaccacgtac
atactggactacttcctgcccaagctgcttcgctgcagcccctccagtttggctcacatg
gtgcaggccttgcaggatacaccaccctgcagcacaggtccttcaggcagcaggggtgca
ctgggagctctgatgacgtgcctgcgggcagccagggcccagggtgttgttccatcctca
gaagaaggtctgtggggaggactggtgccccttcccttactccaacaagccctgataaac
aaacatgatcaagtgaggatggacgctttaggtttggtgtgcgagagccaccgcagcact
gaggttctgacctcacaggaaatgggcctgatccgccacttcctgccgcccaatctcaac
agtcagtcccctggcgtcagacagcagacagtcagcctgctgaagaagttactttgtaga
gtgaaggacagcactcaactgctgcagaagagactgagtcaggagagagaccaggagcag
agagacagagacaaacacacactacatctgtacaaggagttcctgcgctggctgtgtagt
aggctgctggaggttttgcttcctggagcttccttttctaaatgcctcatgtcccttcac
ctgctgtgtctactgggccagctcttcaccttcagcactgggcctgatgtgtttgccctt
ggtgaagttgtgacctctgtgcatgctcagaatgtcctctactgtgttgccagcaacttc
ctggaggtcaaacagctcgcatcatcgctactacggcaactccctccatcagctgtaggg
ctacaggagccagacaggatgcgttgtgtccttcaggctgctctggacctcagtactagc
accaagccttttgacagcgttacagcagcccacctcctcaacctactgctgcaccagcca
gacctgagccaggctctgctgcactgtgcccagcagcagggcctcgattttcaacttccc
tccccaccgaccatggcttctgacatgctcatcttggagctcaacactctggctgtggtt
cagttcttgctgtgctgtctgcagtcagaggtgtcgagggccgagtcttctctcttacag
gcagctgcttcctatcctctgtatggcagagctcattgcatcacagctgtactgcagcat
ctaaacactgagagtctgacacagactgagcagtggagaagtctggtgtcagagctgatt
gctgtgtgctacaggatgtctgatgtggtttcccctgtagtccagagctcctccccagaa
ggactcatccccatggacactgactcagagacctcagctggtctgcagaggatcctgcag
gagatccagcccagggacaccaatgacttcttcactagtgccagacagctggacacacac
catggagatgatcagacacagagtcaaaccacgcacaccccgtcactggacactggcggt
gagagctacagggtgacagcccagatggtgctggtatgttgctggcggagcatgaaggaa
gtggccatgctgctcggacagctgtgtcagagcctgcccctgcactacaccaatgacaag
gcacacacacgcccagggctcatcacagaggagcaggtggagggggtaggcctgtacttc
cgtcagcagctcctgcagtcccgtcatcgtggcgcctttgaactggcttatgtgggcttt
gtacgcctcaccgacatgctgtgcaggagtggaagtcagtctctgcagcagcttccagcc
cgctggctgtccgaggttctggatgaggtcaaatccagcgatccgtcgtccaagctgtgt
gccacacggcgcagcgctggaatacccttctacattcaggctctgctctcctctgagccc
aagtcatccagttgcagtctgctgaagatgacaatgagagaactgatcaccttggccatg
ccatcagctgacaggaacactgacagctccactgtccctcaggtccatgctctgaacatc
ctcagggctctgtacagggacactcgtctgggggaaaacatcatccccttcgtctcagat
ggaatgcaggccgctgtgctgggcttcacctctcctgtctgggcagtgaggaactcctcc
actcttctcttcagcactctaatcacaaggatctttggcgtgaagaaagggaaggacgag
cactcgaaaaagaacaggatgacgggcagagagtttttcactcgttttccagctctctat
ccgttccttctgaaccagctggaggaggctgcagccacagtggaaagtgacagtggtcag
gtgaagctacaccccagtctcttcttgctgctgctggtgctcagtcgactctacccttct
ccaatggatggatcctcttcacctctgggacttgcccctttcatgtccttcatcattaga
tgcagtcattctgcagtgtatcggaccagagaaatggcagctcgggccctcgtccccttt
gtgctggtcacccaggtcccgtccacagtccagtctttactgcaggagcttcctacagag
ccaggacccagaatccaacacaaccacatccatgggactctgctgcaggtgctgtttctt
ctgcgctcctaccagactgactcacacagacccctgccagcaggaaatggcatcgctgga
gccctcagtcagcgcatgtggctcgcctctcgacagaatagctgtgtggtgaccagagga
gcctttctggatgtgttagtgtgcctgtgtgggctgaagatcagtcttcttgaagaatca
gaagtcggcgagctccgtcagcaggctctgtccgtcctgatggcctcagagctggtcatc
tctgagccttcctctaccacccttgggcctggcagcacccagtacctgctcagcctggcg
cgggtggccctcagcgctggcgtggagatccctgagctctggaggagccgtcagttgacg
agccagctcctgcagtgtctgctgcagtgcccgcagtacgaagtgagggagctggtgctg
gagggggtcctgaggaagctgcaggaggaggaggaagagaaggacaatgagaagaggaga
cctcagtggctggacgagaccacactgtctaacctgaccaccctggctcttcatgagaca
cacccccagtgtctggccaaggtccttcaggtgctgtgtgtgttgatctccagtggtgaa
ctcctatggagggatgatgggaagactttgtcccaggaggaggtccttctgcacctcttc
acactggctcaaaactctgttcacagtgtggagcttcactgtgctgccctgaccctggtc
tctcaactcgtggttcagctggtgaactctgacccaaagggtgcaagtgcaatgtcttgc
ttggctcagtggggggcgctggtgtgctcatgctgcagcgaggagcagccagtggaggtg
aagctgatggctgccaaggtgttggtcaactgtacagacactctgctgaccagccctcat
ctgccactgggcctgtccactacagtttctctgtgggggagtctgttcacattactgcag
gatgaagatcaggacgtccgagattcagcctctgacttcatctccaatgtaccagcacct
ctcaatatgacaggtgtgtccgtgtgtcctccagtagcaatggactcaggcatggggctc
ctgtgcaggctgtttgagctgtggggacaggttcctgcaggttccctcgctctgacagag
tggctgctgggagatgaagagggcagtgatgaggcagttgcagacgaagcttccagtctg
gatgaggaagacttcctgtttgagaagggggatcttaacctgtgggccgagcctgtccaa
tgggtgaagctgcttcacggaaacctcagctccctcatcctgaccttcaagcagacccag
tgctcaggaaccaccagccaagaccaagccaagctccaagcacttttaacccaggcccaa
gccaaggccctcagctcccaaaaggccctggactccctccctgtcctgccccagttttcc
tgcaccgtggagcatgcccggctgacgctgcggcaccagagggccacgctggctctggat
gtgctggagaggctgaggtaa
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