Lates calcarifer (barramundi perch): 108885969
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Entry
108885969 CDS
T04895
Symbol
otoa
Name
(RefSeq) stereocilin
KO
K25029
otoancorin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108885969 (otoa)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Others
108885969 (otoa)
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Ortholog
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GFIT
Motif
Pfam:
Mesothelin
Stereocilin
ALTTAQ_rpt
Alpha-mann_mid
Motif
Other DBs
NCBI-GeneID:
108885969
NCBI-ProteinID:
XP_050931926
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Position
LG15:12141561..12153219
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AA seq
1145 aa
AA seq
DB search
MAPKGGTFLFLLIVACAVMANLPTMKPNEHDYKDMAKKLMAKCQKQGYQVPKMMLLNTVF
DNSNLPMNDRNADTSNPTLTAFLDVLSSATGYPNKDSISQKPMDDSDKMTTQMWNCTHLT
QMIRQMRNCSEASACYMRAFVALKSWKALITQGENNMDPDDYDTLLWAAKPALEDMASSG
VSLPPKVDGGNMKKMMITLREVHATMSDDQRSEVAKWAKEQIAQNNFNCTMMPPSDSRST
HMERCKPSLEWLDLDAMTEMGPYLSHLASSDLDSSPKEKLCEFFHSTKLKSSISETTKIK
PSLGTTFLQKVKECFGGKMEFAQHVDKLGALACFYFDPPHLTSDLAKKFLSELDNCEGPR
ITSVKKHLVKSLFANSSPAEALTELGSSVTLLTPRQLSEINGTDLKEVLKKLGDKVKWTK
AQLRTLVKKQLGDDECKDVSGEELKALQSVAEGVPNCVLKRVKAREILDDTEALKNISKR
MKKAQLKAMLQGLHKDMDPSELVKKLSGPLLHSVSLNRLEKANITSLEEVGNKTWSQSQA
AYLARKMQKLKKNLQFWKLHSVIQGITCKMVDNVADSDTRDMAEAMTETPQWLSKVQAGC
AARKLFVTLEKERADYFKTITGDELGRIPTLLLIHLWPSKVKDLPDSVCPIFLDKMEMAN
LSSLSLHAPSRPALTQKALHCLANGTDLSVLTTNDMSRLGPLLCELSASQLRLMAPEVIN
SNLQAMASCQHIPKDHRADLIQLVNQTFGNPSDWSPETMEMLSPLLILDDNAISALPNKP
WMKDILYFLESRMSLSSDALRKKLFSLATTSNTTSNAVRRKRAADSNNGSDHDKVPTVQL
IEELQMENVYWTAAQLDLMSKDTFLATVEILGSICNYNADQLAVLSKKAAQAFGPVSQMT
ENDVMQMGCITQGLSDADLEKLPLPLDAMEGIAHCGWNDSQMEPLWKGVAKYNNLTAEKL
EAAEMVALNRSICGLSSTEIQQLNKEAFKDAVGSMDGIQCSFKVTQQLKTLAMSAFGEPS
SWTEAQVADLGNIIAGLDANELASLDPPVFSFVKGTCIPRIPPDNFAALSVVQLQALGPD
NAAVVTAEQRAALENAQQDALDRAVTGSSEQPSRTSESGAPSLSVEGISAFMKPILFLLM
GFLLL
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaaaggaggaacatttttatttctccttattgtggcctgtgcagtcatggct
aacctcccaactatgaagcctaatgaacatgactacaaggacatggccaaaaaactgatg
gcgaagtgccagaaacagggataccaggtgcctaagatgatgctgctgaacaccgttttt
gataacagtaatttgcctatgaatgacagaaacgctgacacatccaaccccacccttacc
gcttttcttgatgtcctgagttctgccactgggtacccaaacaaagattcaattagccaa
aagcccatggatgattcagataaaatgacaacccagatgtggaattgcacccatcttaca
caaatgatcaggcagatgaggaactgctctgaggcatctgcgtgttacatgagggcattt
gtggccctcaagtcctggaaggctttaatcacacagggtgaaaacaacatggacccagac
gactatgacacattgctgtgggctgccaaacctgcactggaggatatggcctcctcagga
gtgagcctccctcccaaagtagatggcggaaacatgaaaaagatgatgattacgctgcgg
gaggtgcatgctaccatgtctgacgatcaaaggagcgaagtggcaaaatgggcaaaagag
cagatcgctcagaataacttcaactgcacaatgatgccaccatctgactcaagatcaaca
catatggagcgctgcaaaccttcactggaatggctggacttggacgcgatgaccgagatg
gggccttacctctcccatttagcatcaagtgatcttgattcttctccaaaagaaaagctg
tgtgaatttttccactcaaccaagctcaaatccagcattagcgagacgaccaaaataaaa
cccagcctgggcacaacgtttctccaaaaagttaaggagtgcttcgggggaaagatggag
ttcgcacagcatgtggacaagcttggtgcactggcttgtttttatttcgacccaccacac
ttaacttctgacctcgccaagaaattcctctctgagcttgacaactgcgaaggccccaga
atcacatcggtgaagaagcacctcgtaaagtctctgtttgcaaattccagccctgccgaa
gcactaactgagctgggcagcagtgttaccttgttgacccccagacaactgtctgaaatc
aatggcactgatctcaaagaggttctgaaaaagctgggtgataaggtcaaatggacaaag
gcccagctgcgcactctggtcaaaaaacagctgggcgatgacgagtgtaaagacgtgtca
ggtgaggagctgaaggcgcttcagtcagtcgcagagggtgtgccgaactgtgtcctcaag
cgcgttaaagcccgggagatcctggatgacacagaggctctgaagaacatctccaagcgg
atgaagaaggcacaactgaaggccatgctgcaggggctgcataaggatatggatccctca
gagctggtgaagaagttgtccggccctttacttcacagtgtttctctaaacagactggaa
aaagcaaacatcacctctttggaagaagtggggaataaaacatggagtcagtcacaggca
gcatacctggcaagaaaaatgcaaaaactaaaaaagaatcttcagttttggaagctgcat
tcagtgatccagggcataacctgtaagatggtcgacaacgttgctgacagtgacactcgg
gacatggctgaggccatgacagagactccacagtggctctccaaagtgcaggcaggatgt
gctgcccgaaagctttttgtgactttggagaaagagagagccgactatttcaaaaccatc
acaggggacgagctgggcagaattcctaccttgttacttattcacctgtggccttccaag
gtgaaggatttgcctgactctgtgtgtcccatcttcctcgacaagatggaaatggccaac
ctgagctcattgtctcttcatgccccgtctcgccctgcgctcacccagaaggccctgcac
tgcctggccaatgggacagatttatccgtactgaccactaacgatatgtccaggctcgga
ccgctcttgtgcgagctgtcggcttcccaactgcgcctcatggcccctgaggtcatcaac
tccaacctccaggccatggcttcctgccagcacattcctaaagaccacagggcagatcta
attcagctggtcaaccagacttttgggaatccatctgattggtcccctgagacaatggaa
atgctcagtcctctcctcattttggatgataatgccatatctgctctgcccaataagccg
tggatgaaggacattctctattttctggagtcacgtatgtccctaagctcagacgccctg
agaaagaaactcttcagtctcgccaccacctcaaacaccacatcaaatgcagtgcgtaga
aagagagcagctgacagcaacaatggtagtgaccatgataaagtacccactgtgcagttg
atcgaagaattgcaaatggagaacgtctactggacggctgcacagctggacctgatgtca
aaggacaccttcctcgccactgtagaaatacttgggtccatctgtaactacaatgcagac
caactggccgtgctcagtaaaaaagcagctcaggcctttggaccagtgtcacaaatgact
gagaatgatgtgatgcagatgggatgtataactcagggcctctctgacgcagacctggag
aagctccccctccctctggatgctatggagggaattgcccactgcggctggaatgattca
cagatggagccgttatggaagggtgttgctaaatataacaacctgacagcggagaagctg
gaagctgcagagatggtggcactgaaccggtccatctgtggcctcagctccactgagatc
caacagctcaacaaggaagctttcaaggatgctgtgggctcaatggatggtattcagtgc
tccttcaaggttacacagcagctgaaaactcttgctatgtcagcatttggagaacccagc
tcctggactgaagcgcaagtggccgacttaggcaacatcattgctggattggatgcaaat
gagttggcttctttggacccacctgtcttttcatttgtcaagggcacctgcatcccacgc
ataccaccagacaactttgctgcactctctgttgttcagctgcaggctcttggtcctgac
aacgctgctgtggtaactgctgaacagcgagctgcgctggagaatgcccaacaggatgct
cttgacagggctgttaccgggtcctctgagcaaccatcacgcaccagcgagtcaggagct
ccatcactgagtgtcgaggggatctctgctttcatgaaacccattctgtttctcctcatg
ggtttcctgctgctgtga
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