Lates calcarifer (barramundi perch): 108886500
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Entry
108886500 CDS
T04895
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108886500
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108886500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
108886500
NCBI-ProteinID:
XP_018536901
UniProt:
A0A4W6ETD3
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All DBs
Position
LG12:23212217..23219016
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AA seq
706 aa
AA seq
DB search
MSRSPDNEDGCFVAMDTEDDGTEPAGITEELEAKMGTCRQEGNMDSGAKGGGRTMVELPE
EVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAYQCYHGFLRAVQEGNIQWESRTYPYP
GTPITQRFSHSACYYDSNQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPS
PKAGATLVMHKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPM
AGHSSSVIGNTMVVFGGSLGARQMSNEVWVLDLEQWSWSKPPISGPLPHPRGGQSQIVID
DQTLLILGGCGGPNALLKDAWLLHMDAPPWRWQQLQVENEDHGAPELWCHPACRVGQCVV
VFSQAPSGRAPLSPSLNSRPSPISATPAPLGPEPPSLRSQSPVRSGAAGVVLGAVEEAPC
VNGRWGTLRPRPSARGSARDGSPSSSQQPSPSQGPDSPPLPPLPPLLNGSSPSPRTSPAQ
AASPPSRPHPPASTDYGWESPPSASHHPEVPSTNGLHTPPTGSPRTPPGAVSPAALRRGL
EAVKNKSSSSLPSSSSSSSLQTQGASPGAGSGGGGAGPPVTPPSSSSSPPQAVGADGHAI
PPIARRLGHHPPQSLNVGKPLYQSLNCKPMQMYVLDVSRAKSAGVVSWRVYGNGTPAAVT
GPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcccctgacaatgaggatggatgctttgttgccatggatacagaggacgat
ggtacagagcctgctgggattacagaggaactagaggcaaagatggggacctgccgacaa
gaagggaacatggacagtggtgccaaaggaggggggagaacaatggtggagttgccagag
gaagttctcgaatatattctgtccttcctctcaccttaccaggagcacaagactgctgcg
cttgtatgtaagcagtggtatcgcctcattaaaggtgttgcttatcagtgctaccatggt
ttcttgagagctgtccaggagggaaatatccagtgggaaagtcgcacatacccatatcca
ggaacccccatcactcagcgcttctcacacagtgcatgttactatgactcaaaccagtcc
atgtatgtgtttgggggttgcactcagagtagctgcaatgctgccttcaatgatctatgg
agacttgacctcaacagcaaggagtggatccgccctttagcctcaggctcttatccatct
cctaaagctggagcaactcttgtgatgcacaaagatctattagtgctttttgggggttgg
actcgtcctagtccgtatccactgcaccaacctgagaggttttttgatgaaatccacacc
tactctccttcaaagaactggtggaactgtatcgtaactacacatggacctccacctatg
gccggccactcttcctctgtaattggaaacaccatggtggtgttcgggggatctttagga
gcacgtcaaatgagtaatgaagtctgggttctggatctggagcagtggtcctggtccaaa
cctcccatatctggcccattaccacacccgcgaggaggccagtcacaaattgtcattgat
gatcagacactgctcatcttgggaggatgtggtggccctaatgcactcctgaaagatgcc
tggctgcttcacatggatgcacctccatggagatggcagcagctgcaggtggagaacgag
gaccatggagccccggagctttggtgtcacccagcttgtagagtgggccagtgtgtggtg
gttttctcacaggctccatcaggccgtgccccgcttagtccaagtcttaactcccggccc
tcccccataagtgccacgcctgcccctctgggccccgaaccgccttcactgcgctctcaa
tctcccgttcggagcggggccgctggcgttgtcctgggagctgtggaggaggctccatgt
gtaaatggtcgatggggaacgctgagacctcggccttcagcaagaggcagcgccagagat
ggaagcccatcctcatcccaacagccgtctccctcacaaggtccagacagccctcctctt
cctccacttcctccgttattaaatggatcctccccttcaccccggaccagcccagcccag
gctgcatctcctccctctcgccctcacccgcctgcctccacggactatggctgggagtct
cccccttctgcctctcaccaccctgaggtgcccagcactaacggcctgcatacacctccc
acaggttccccacgcactcccccaggagcggtgtcccccgctgccttacgacgaggtctg
gaggcagtgaaaaacaaatcttcctcttctttaccatcttcttcatcatcgtcttccctt
cagacacagggagcttctcccggagcaggcagcggtggaggaggagcgggtcctcctgta
acccctccctcgtcatcctccagccccccacaggccgttggagctgacggacatgctatc
ccacctattgcacggcgtctcggccatcacccgcctcagagcctgaacgtaggaaaacct
ctgtaccagtctctcaactgcaaaccaatgcagatgtacgtgctggatgtgtcccgggcc
aaatctgccggggtggtgtcctggagagtttacgggaacgggactcccgcagcggttacg
gggccaccagagaccagccttcacacagtggtacagggcaggggagagctcatcattttt
gggggcctcatggacaaaaaacagaatgtgaagtactaccctaaaaccaacgccttgtac
tttgtacgcgctaaaaggtaa
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