Lates calcarifer (barramundi perch): 108887186
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Entry
108887186 CDS
T04895
Name
(RefSeq) zinc finger protein GLIS2 isoform X1
KO
K09233
zinc finger protein GLIS2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108887186
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108887186
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
108887186
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
108887186
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_8
zf-C2H2_4
zf-C2H2_6
Zap1_zf1
zf-met
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
108887186
NCBI-ProteinID:
XP_018537980
UniProt:
A0A4W6G9N9
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Position
LG5:complement(4620963..4646363)
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AA seq
491 aa
AA seq
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MLSLDEPLDLKLPSGRTDGPVRLGKRAYPSSICAPLSTTRPRLLCTTFPSPPSSPDSQSS
SQERPGSCFTPPAMDLSLSPSSRHTSSLSPSPSSPSSPSPSSPLESPHSSSSPQPHLFSR
EAARHQGVEGGASPQGYPFYLPIGSPPRGYSFPSSMFIGQNREKQVSPEPSLDGQLACRW
MKCHLLFDSLQDLVDHINDFHVKPEKDSGYCCQWEGCARNGRGFNARYKMLIHIRTHTNE
KPHHCPTCNKSFSRLENLKIHTRSHTGEKPYICPYEGCSKRYSNSSDRFKHTRTHYVDKP
YYCKMAGCLKRYTDPSSLRKHIKAHGHFVAQEQGAPSRLGSGLGVPGHQSVAELPSVGGA
HIIIPGAAAALLGGLGTSLPLSAFCHARAMGHHGAPLFSVGGGSGMGPLGLSDSPLLHFG
LSAASMLGLGALGGLRRMAGKEMEGEEEEEEGEEGEVLNLSAGVVPPRRSDPLSWVVVPP
RALLLKPAVVS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcattggacgagccgctggatttgaagcttccctcaggacggacagatggtcca
gtgagattgggaaagagggcatatccttcctctatctgtgcccccctcagcaccacacga
ccacgcctgctatgtaccacctttccttcaccgccctcctccccagattcccagtcttcc
tctcaagagcgacccgggtcctgcttcactcctccggccatggacctcagcctgtccccc
tcctcccgccacacctcctccctctccccatctccttcctccccctcttccccctctcct
tcctcgcccctggaatcccctcacagcagcagcagccctcagccacatctgttctccagg
gaggcagctcgtcatcaaggtgtggagggcggagcttccccgcagggttatccgttttat
ctgccgatcggaagcccaccgaggggctacagcttcccctcctccatgttcatcgggcag
aacagagaaaagcaagtttcaccagagccctcactggacggtcagctggcctgccgctgg
atgaagtgccacctgctgttcgactcgctgcaggacttggtggaccacatcaatgacttc
cacgtcaaacctgaaaaggattctgggtactgctgccagtgggagggctgtgctcgaaac
gggaggggcttcaatgccagatataaaatgctgattcacatccgcacacataccaatgaa
aagccgcaccattgtcctacctgtaacaagagcttctcacgtctggagaacctgaagata
cacacccgctcacacacaggagaaaaaccctacatctgcccgtatgaaggctgcagcaaa
cgttactccaactctagcgaccgcttcaaacacacccgcacccactatgttgacaagcct
tactactgcaagatggcaggctgcctgaagcgctacacagatcccagctccctacgcaag
cacatcaaagcccatgggcactttgttgcccaggaacaaggtgctccgagcaggctgggg
tcggggctgggcgtccccgggcaccagagcgtcgctgaacttccctctgtaggcggagcc
cacattatcatacctggagctgctgcagctcttcttgggggtcttgggacctctctgcct
ctttctgctttctgccacgccagagctatggggcaccatggggcaccactcttttctgtt
ggaggcggcagcggcatggggcccctaggtctctcggactcccctctgttacactttgga
ctttcagctgcttcgatgttagggctgggagctctgggaggtttgcggcggatggcggga
aaggagatggaaggcgaagaagaagaagaggaaggagaggagggggaggtgctgaacctg
tctgcaggggtggtgccgcccagacgcagtgaccctttgtcctgggtggttgttcccccg
agggcgctcctcctcaaaccagctgttgtcagctag
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