Lates calcarifer (barramundi perch): 108887280
Help
Entry
108887280 CDS
T04895
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like
KO
K14946
RNA binding protein fox-1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108887280 (rbfox1l)
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108887280 (rbfox1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
108887280
NCBI-ProteinID:
XP_018538105
UniProt:
A0A4W6D338
LinkDB
All DBs
Position
LG15:complement(10996890..11011146)
Genome browser
AA seq
383 aa
AA seq
DB search
MLSSPTVILQPYGLPVYPQTTTCYPSIVQGGPTQEAGPGSGDPALPQVYAPPPSYPPPGQ
GPPTSAGRLPPLDFTSAHPSSEYPEHPQLRVYQGPQHEGAETLTSSTTEDALAPVTSDPQ
SLSVSVSSGGGAGSGSEEEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESATEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNGDIS
TSGWKINPVMGAMYAPELYTVASFPYPVATPTLAYRGSALRGRGRAVYNTIRSAAATPAT
VPTYPGVVYQDGLYGAEVYGGYPAAYRVAQSASAATATYSDGYGRVYATAADPYHHSVGP
TTTYGVGTMASLYRGGYNRFTPY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctcacccactgtgattctccagccttatggactgcctgtctacccacagaca
accacatgctaccccagcatagttcagggaggccccacccaggaggccggcccaggcagc
ggcgaccccgccctacctcaggtctacgccccgcctccctcctaccccccaccgggtcaa
ggtccgccaacatctgcgggcagactcccacccctcgacttcacctcagcacatcccagc
tcagagtaccctgaacatccccagctcagagtctatcagggccctcaacacgaaggggcg
gagaccctgacatccagcaccacggaggatgctttggcccctgtgacctctgacccccag
tctctgagcgtgtcagtgtcttcagggggcggggcaggaagcggaagcgaggaggagggg
tcaggtaaggcccagccgaaacgcctccacgtctcgaacatcccgttccgcttcagagac
ccagacctccgccagatgtttgggcaatttggcaagatccttgatgtagaaattatcttc
aatgagaggggctcgaagggctttggattcgtcaccttcgagagcgcaactgaggctgac
cgagcacgagagaagctgaacgggacaatcgtagagggcagaaagattgaggttaataat
gccactgcaagagtagtgaccaagaagccccagactcctctggtgaatggtgacatttca
acttctggatggaagatcaaccctgtcatgggagcaatgtacgcacctgagctctacaca
gttgccagtttcccataccctgtagcgactcccaccttggcctaccggggctctgctctg
cgtggccgaggtcgagctgtgtacaacacaattcgctctgctgcagccacgcctgccacc
gttcccacctaccccggggttgtgtatcaggatggtctgtatggagcagaggtctatggt
ggatatccagcagcttacagagtggctcaatcagcatctgctgccacggcgacctacagt
gacggatacggacgggtctacgccacagctgcggacccctaccaccactctgtcggacca
acgacgacatatggagttggcacaatggccagtttgtacagaggagggtacaaccgcttc
accccatactga
DBGET
integrated database retrieval system
