Lates calcarifer (barramundi perch): 108887929
Help
Entry
108887929 CDS
T04895
Name
(RefSeq) WASP homolog-associated protein with actin, membranes and microtubules
KO
K20479
WASP homolog-associated protein with actin, membranes and microtubules
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108887929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108887929
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108887929
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108887929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
Motif
Other DBs
NCBI-GeneID:
108887929
NCBI-ProteinID:
XP_018539147
UniProt:
A0A4W6C8Z8
LinkDB
All DBs
Position
LG2:complement(6912614..6923507)
Genome browser
AA seq
784 aa
AA seq
DB search
MNNVECERLDSLEGWVAVKSNIFEETETFKLGFIVQWNVIECKFAVTCHNRTLQRQKRKA
EVAVGDSQMSWAGLFSVNDLKHIHQQFACVADVLGACFPDLSEFEEGNIWDLLFLSRRSG
PDDDERDFDTPCRKLEKYFSTAIDICGRKIVLDTLFSQDERDVDEYFENLQEFRRKTMQE
EMSRAKGHLRQMLQSHGGADRMVVLLSIYEEEDEAYQDLVTVATTFFQYLLQPFRDMREL
ACLYKLEILKSLEFEDLGPKRIAALEKEAEEWRTKAEDAVASIQDITVTYFAQTSKALAG
MLKQMEEDKCRFGAAAWASAAPRLEKLRFLLAKETLQHMRATEMCLNRKKDSIREKLGSL
SDRVQSQRADSRSASDDGQQQETVDQLELQFYETQLELYDTKFEILKNEEQLLMAQIDTV
RRQIKELKEEVVYYDVCEDPEELQSMVHTGVQQANSPAVTQLKRRLQTLETKRGNICARR
AYLRNKKDQCMDAQEQKRLAAEQSSLVFNQHHQVHLKREKRKEEEQRRKQWVDQEREKTL
SRLRSFREKRQGQYILKTPQSRMSPTEVPCPSQPLSIISLGPSPSSEGPPPSVRPAPRRS
KAPKKQQPKDIPVQIYSAPPPPTTNMPTAPPPPPPPPPPPPPPPPLLPPALPPPPPQAFS
EDTPMALSEKEDPPFPAKNMLKQNIGTMDEVLASLQRGQIQLRKVPTPRTVPPAADPRSS
LMSAIRQGVTLRKVVPARAEVPSSADNELERSIKAAMLRMKKVAADSDEEDRGDDETQSV
DWDS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgtagagtgtgagcgtttagatagtctggagggctgggtggcagttaaaagc
aacatattcgaagaaactgaaacgtttaagttgggttttatcgtacagtggaatgtcatc
gagtgtaagttcgctgtcacctgccataaccggacgttacaacggcagaaacgcaaagcc
gaagttgccgtcggcgactctcagatgagctgggccggactcttctccgttaacgatctg
aaacacatccaccaacagtttgcatgtgtggcggacgtcctgggagcctgctttccggat
ctgtccgagtttgaggagggcaacatttgggacttgctcttcctgagtcggaggtcaggt
cccgacgacgatgagagagattttgacacaccgtgtaggaaactggaaaaatatttcagc
acggccatcgacatatgcggacggaaaattgttctcgacacgttgttcagccaggatgag
cgggatgtcgacgagtactttgaaaatctgcaggagttcagaaggaagaccatgcaggag
gagatgtccagggccaagggccacctgcgacagatgctgcagagtcatggcggcgcagac
agaatggttgtgctgcttagtatttacgaggaggaggatgaggcctaccaggacctggtc
actgtggccaccaccttcttccagtatctgctgcagcctttcagggacatgagagaactg
gcctgcctctataagctggagatcctgaagtctttggagtttgaggacttgggtcctaag
agaattgcagctttggagaaggaggcggaggagtggagaacgaaagcagaagatgcagtt
gcctcaattcaggacatcactgtcacctactttgcacaaacttcaaaggctctggctggc
atgttaaaacaaatggaggaggataagtgtcgtttcggagctgctgcctgggcgtctgca
gctcccagactggaaaaactacgcttcctattggccaaagaaaccctgcagcatatgaga
gctacagagatgtgcctcaaccgcaagaaagacagcatcagagagaagctgggcagcctg
tctgacagagtccagagccagagagctgactctaggtctgcgtctgacgatggccagcag
caggagacagtggaccagctggagctgcagttctatgaaacccaactagaactgtatgac
accaagtttgagatcctgaagaatgaggagcagctgctgatggctcagatagacacagtg
cgacggcagattaaagaactgaaggaggaagtggtttactacgatgtgtgcgaggatcca
gaggagctgcagagtatggtccacacaggtgtccaacaagcaaactctccagctgtcact
cagctcaaaagacgcctacaaaccttggagaccaagagaggcaacatctgtgcccggcgg
gcttatctccgcaacaaaaaggatcaatgcatggatgcccaagagcagaaaaggctggct
gccgagcagagctccttagtcttcaaccagcatcatcaggtccacctgaaacgagagaag
aggaaagaggaggagcagagaaggaaacagtgggtggaccaggagcgagagaagactctg
agtagattacgatccttcagagagaagcgacagggccagtacatcctgaaaactcctcag
tccaggatgtctcctacagaagtcccgtgtccctcccagccactgtccatcattagcctc
ggcccttctccctcctctgaaggacccccaccctccgtccgtcctgcacccagacgcagt
aaagcgcccaagaaacagcagcctaaagacatccccgtccaaatctactctgcaccgcca
cctccaacaacaaatatgcccactgcacctcctcctcctccccctccgccccctccacca
ccaccacctcccccactactgccccctgctttacctcctccacctccccaagctttctct
gaggacacacctatggctctcagtgaaaaagaggaccccccattcccagccaagaacatg
cttaaacaaaatataggaacaatggatgaagtgttggcctcactgcagcggggacagatt
cagctgcgaaaggtccccactcccaggacagtgccccctgctgcggacccaaggagcagt
ctgatgtctgccatccgacagggagtcactctgaggaaggtggttcctgcacgtgcagag
gtcccaagcagcgcagacaatgagctggagcgcagcatcaaagccgccatgttgaggatg
aagaaggtggcagccgactctgatgaggaggacagaggagacgacgagacacagagcgta
gactgggacagctga
DBGET
integrated database retrieval system
