Lates calcarifer (barramundi perch): 108887974
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Entry
108887974 CDS
T04895
Name
(RefSeq) secretory phospholipase A2 receptor
KO
K06560
mannose receptor, C type
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108887974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108887974
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108887974
04090 CD molecules [BR:
lcf04090
]
108887974
04091 Lectins [BR:
lcf04091
]
108887974
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Phagocytosis
C-lectin receptors
108887974
Pattern recognition receptors [BR:
lcf04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
108887974
CD molecules [BR:
lcf04090
]
Proteins
108887974
Lectins [BR:
lcf04091
]
C-Type lectins
Group 6: Mannose receptor family
108887974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
UL45
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
108887974
NCBI-ProteinID:
XP_018539245
UniProt:
A0A4W6CXA2
LinkDB
All DBs
Position
LG2:complement(6343288..6364041)
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AA seq
1486 aa
AA seq
DB search
MLTQSFRCIDSVAVVATICVTVLLAKSCMCVTEEDDEVLEKNQLMEFYKKGIFILQSAPL
ERCVTVDRSNLVLEDCERPTRRMLWKWVSRHRLFNLGTSTCLGLNISDTTQALGTFECDT
ALPMLWWRCSGNMLYGASQWKVALAGRLLVVKKNSYHEWKRYNTPREGPCSHPYEDIHTL
LGNAHGMPCALPFKYNNKWFSECTTEGREDHLPWCATATRYDEAERWGFCPVQDSSCEHF
WESNQELHACYQFNLYTILTWSQALSTCQAQGGNLLSVTSLAEHRYIRDRLASVGAMVWI
GMNHLKDSQGWQWSDGAPLSLVNLTTALPASPLQDNSQCGVYNSAFEGHWQSLSCESALP
YICKKTPNNTRRAEPLENWQYIHTECANGWWPHNGFCYRVLSEAEAGSWEESARACGTQG
ANLTSLNSLSEVEMLLNLLANFSGESTEVWIGLWKRASSPTVQWSDGSPVTLTLWHQYHP
PRNLTDATLCAKAERKKGNWLLASCDERLPAVCRRESQNPVHPPGSWDEGCPEGWKRHGH
SCYMVTSHEQSYEDALLGYYCKAPLLTVENRFEQAFVNSLLSERGANSSTYYWIGLTDQD
KMKEYRWLSHNGSSLPLTFTNWNKHQPASAGGCVAMSGGPALGYWEVKDCNSHKALSVCK
QSISSYHDLQLPEHHIDAYAPCPPGWESHAGLLVCFKVFHDEKVLMKRSWVEADFFCQAL
GAQLASFHHYEEQVFVKQLLSTMFEGTEGRWFWVGLNKRDPVHPGAWEWSDSSPVVTSFI
EDKNEEDDRRDCAVYSHMTNTLMPQPCDTKHEWICTISRGDKLKKPYWYTEQSEPWVFYR
GAEYLLAKQPFDWDAVSLACQMMGAYLLSIHSKEELHFVKERLRRLSLGPTDWWIGLSTG
QPGEVVRWSDKTGVDFQNWADGSAGGDLRKNGLCVTMSSSTGKWSTSKCSDLHGYVCKRK
TVSVVETPREPHYIGGCPEKWLYFGHKCLLLHLPGSPKEGKSWKDAQSICNSFEGTLVAI
EDEIEQAYITMLLQGSSVGVWIGLEDTMKWTNGKPVSYTNWSPIEPKSYLTEDEWLSGFA
DEPLCTVLSNNHNFHLTGKWYDEKCSESGYGFVCQKPQDPSKPPTHSYHHPLPDNIEYRT
RSYKVVSGNMSWYDAVHLCIENDSDLVSITDAYHQAFLTVLVNRLAVPHWIGLYSQDSGI
NYQWLDGSDTVYTHWDAADDDDDFVTGECVYMDVSGGWRRADCETLLPGALCHIPPPRNK
PFISYEGVCPSTWVKFGHGCYNFEPVVQKLTFEESREHCRQKVNTSDVLTIESETENRFV
LEQLWSSGFVHQAVWLGMYFNIDTDSMNWVDGSPMDYTNWPNKAPDPKLLTTDTCVTTRV
VDGVWYLSRCNERLGFVCKTISDVVTEVEVEPLNGLHHGIIAAAVLVAVLIFVLLAGAMW
FVYKRNSARFRGIPMLGSAYYRQTSSQALESDGNVLITDLEAHSGE
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgcagtcgtttcgttgcatcgactccgtggctgttgtggcgaccatttgtgta
acagtgttgctggcgaaaagttgcatgtgtgtcaccgaggaggacgatgaggtcctggag
aaaaaccagctcatggagttttacaaaaagggtatctttatactgcagagtgcaccactg
gagcgctgcgtcaccgtggaccgctccaacctggtgctggaggactgtgaacggccgacg
cgccgcatgctgtggaagtgggtgtcccgacatcgcctcttcaacctgggcaccagcacg
tgcctgggcctcaacatttcggacacgacccaggctctcggcacgtttgagtgcgacacg
gccctccccatgctctggtggcgctgcagtgggaacatgctgtacggggcatcccagtgg
aaggtggccttggctggacgtttgttggtagttaaaaaaaactcttatcacgagtggaag
aggtacaacacccctagagaagggccatgttcacatccatatgaagacattcacactttg
ttggggaatgcacatggcatgccctgcgctttgccttttaaatacaacaacaaatggttc
tctgagtgtacgactgagggacgtgaggaccatcttccatggtgtgctaccgccactcgc
tatgatgaggctgaaagatggggcttctgtcctgtgcaagattccagctgcgagcatttc
tgggagtcaaaccaggagctgcatgcgtgttaccagttcaacctgtacaccatcctaacc
tggagtcaggcgctgtcaacctgccaggcacaaggtggaaacctgctcagcgtcaccagc
ctggcagagcacaggtacatcagagatcgactggcaagtgttggcgcgatggtgtggatt
gggatgaaccacctgaaagacagtcaggggtggcagtggtctgatggagctcctctatca
ttggtcaatttgaccacagctctgcctgcgagtccactacaagacaacagccaatgtgga
gtgtacaactcagccttcgagggtcactggcagagtctttcctgtgagtctgctctgcct
tacatctgtaagaagacgcctaacaacacccggagagccgagcctctagagaactggcag
tatatccacacagagtgtgctaatggctggtggcctcataatggtttctgctaccgggtg
ttgtcagaggcagaggcaggaagctgggaggaatctgcccgggcctgtggcactcagggg
gcaaacctcaccagcctcaactcactgtctgaggtggaaatgctgctcaacctcctggct
aacttttctggtgagagtacggaggtgtggatcggtctttggaaacgggcatcgtcgcca
actgtacagtggtctgatggttcaccggtgacgctcactctctggcatcagtatcaccct
cctcgcaacctgacagacgcaacactctgtgccaaagcagagcgcaagaagggtaactgg
cttttagcatcatgcgatgaacgtctgcctgctgtgtgtagaagagaaagccagaatcca
gttcatccccctggatcctgggatgagggttgtcctgagggctggaagcgacatggtcat
tcttgttacatggtgacgagccatgagcagagctatgaagatgcactgttgggatattac
tgcaaggctcctcttcttactgtggagaacaggtttgagcaggcgtttgtcaacagtttg
ctgagtgagagaggggccaacagtagcacctattactggatcggcctcacagaccaggac
aagatgaaagagtacaggtggctttctcacaatggctcctctctgcctctcaccttcaca
aactggaacaaacatcagccagccagtgctggtggctgcgttgctatgtcaggtggacct
gctctgggttactgggaggtcaaagactgcaattcccacaaggccttgtcagtgtgcaag
cagagtatcagcagttaccacgatctccagttgccagagcaccacatcgacgcctatgcc
ccctgtccaccagggtgggaatcacacgctgggctgctcgtctgttttaaggtgttccac
gacgagaaagtcctgatgaaacgttcctgggtggaagcggacttcttctgccaggccctt
ggggctcagctggccagtttccaccactatgaggagcaggtgtttgttaagcagctcctc
agtaccatgtttgaaggaacagagggccgctggttctgggtgggtttaaacaagagagac
cctgtacatcctggagcctgggagtggtccgatagttctcctgtggtgacatccttcata
gaggataagaacgaggaggacgacaggagggactgtgctgtgtacagtcacatgaccaac
actctcatgccgcagccctgtgacaccaagcatgagtggatctgcacaatatccagaggt
gataaactgaaaaaaccctattggtacactgagcagagcgagccctgggtgttttaccgt
ggagctgagtacctgctggcgaagcagccttttgactgggacgctgtgtctctggcctgt
cagatgatgggagcctacctgctgtccattcactctaaagaggagttgcactttgtgaag
gagcgtttgcggcggctctccctgggcccaactgactggtggatcggcctgtccactgga
cagccaggagaggtggtcaggtggagcgacaaaacaggggtagactttcagaactgggca
gatgggagtgccggtggtgaccttaggaaaaatgggttgtgtgtcaccatgtcctcttca
acagggaagtggtcgacaagtaaatgcagcgatctccacggctatgtgtgcaagaggaag
accgtgtctgtcgtggagactcccagggagccgcactatattggcggatgtccagagaaa
tggctgtactttggacacaagtgcctcctacttcatctccctggcagtccaaaggaagga
aagagttggaaagatgcccagtccatctgcaactcatttgaaggcacgctggtcgctata
gaagacgagatcgaacaagcctacatcaccatgctgctccagggcagctctgtcggtgtg
tggattggtctcgaggacaccatgaaatggaccaatgggaaaccagtcagctacaccaac
tggtcaccaattgaaccaaagagctatctcactgaggatgagtggctcagtggatttgct
gatgagccattgtgcacagtcctgtccaacaaccacaacttccacctgacggggaagtgg
tacgatgagaagtgcagcgagagtgggtatggctttgtttgtcagaaacctcaagaccca
tccaaaccccccacccactcctatcaccaccctctccctgacaatattgagtacaggacc
cgcagctacaaggttgtgtctggcaacatgagctggtacgacgcggtgcatttgtgcata
gagaatgattctgacctagtcagcattacagatgcctaccaccaggctttccttactgtc
cttgtcaatagattggcagtcccccactggattggactgtatagtcaagacagtggcatc
aattatcagtggttagatggcagtgacacggtctacacacactgggatgcagccgacgac
gatgacgactttgtgactggagagtgcgtgtacatggatgtgagcggaggctggcggaga
gctgactgtgaaactctgctaccaggagccctgtgtcatattcccccgccaagaaataaa
ccatttatctcatatgaaggggtgtgtccctctacgtgggtgaaatttggacatggctgt
tacaactttgagcctgtggtgcagaaacttacatttgaggagtccagagagcactgcagg
cagaaagtgaacacctcagatgtcttgaccattgagagcgagacagagaaccgtttcgtt
ctggagcagctgtggtcgtcagggttcgttcaccaggccgtgtggctggggatgtacttc
aatatcgacactgactctatgaactgggtggatggttcacccatggattacaccaactgg
cccaacaaagccccagaccccaagctgctgactacagatacctgtgttactaccagggtg
gtcgatggtgtgtggtacctgtcacggtgcaacgagcgacttggctttgtctgcaaaacc
atctcagatgttgttactgaggtggaagtggaaccactaaacggtttacatcacggtatc
attgccgctgcagtgctggtggctgtgctgatctttgtcctgctggcaggagcgatgtgg
tttgtgtacaagaggaactctgcacgctttcgcggcatcccgatgctcggcagcgcttat
tacagacagaccagctcacaggctttggagtcggatggaaatgtgctgatcacagacctg
gaggctcactcaggagaatag
DBGET
integrated database retrieval system
