Lates calcarifer (barramundi perch): 108888127
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Entry
108888127 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosine-protein kinase receptor
KO
K05119
anaplastic lymphoma kinase [EC:
2.7.10.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108888127
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108888127
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108888127
Protein kinases [BR:
lcf01001
]
Receptor tyrosine kinases (RTK)
ALK family
108888127
CD molecules [BR:
lcf04090
]
Proteins
108888127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
MAM
Pkinase
Gly_rich
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
108888127
NCBI-ProteinID:
XP_018539473
LinkDB
All DBs
Position
LG19:complement(12307680..12400279)
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AA seq
1532 aa
AA seq
DB search
MDYIRNQQTYLSIVILLINCTCHALLDRFQEEHSDQIFSHHLDSEDDSQITSCDFESLCL
WTLSNHSDQSDWSVVSPRQPESAQVGLMPETDHSEGSSDGHFLLLSSSPAAEASGRCDYH
LTSPVLPGSDRHCTLQMALYESHPGLGNLTLLIKPVLSDSAVHSVVLNHRKRDDQRAKWE
VLESVIGQVDEPFEVTLLYTSCLGEDGVTVALDSLELIDCESEHQDAICGESFHCVNSEV
CIDPSQVCNFHTDCPFGEDEGFICGALPFGSHCSFEQDSCGWSVSNQPLAWRRVAGDALL
EKEDMQGVTLQSTPGHFLFLQVRESNSLREASIQSSSFPPPVSTTACQMRFSLYMHGDFN
GSLLVAIEENGTTTAPLVWERNYQWADDWEDVALQLTDLHHGFHVKVTAVWEQGSNADVA
LDDIALGASCFSTDLNSLLPMMSLEDILSPLPEPSASEVSLMTWWFNSCGASGPHGPTQA
QCDSTYRNKNVSVTVGKEGSLKGVQKWRVPATNRYLISAYGAAGGKGAKNHNKRNHGVFI
SAIFPLEKGDILYILVGHQGEDACPGRNPHTQKICLGESSVIEDDLRGEASAEWAGGGGG
GGGATYIFKMENGELIPLLIAAGGGGNAYLEDPESSLDQIPLEQYENSTLRPSTNGRTGA
AGGGGGWKDSPSPHLRAGRSLVEGAEGGSSCPLALSKLGWSTYGGFGGGGGACTAGGGGG
GYRGGDAALTDEITADGQNGVSFIHPMGEIFLQPLAAMESHGECEIKVQLNCSHCQTQSC
KRDEDTHLILCLCEEDEVLASDNVTCIGTVAAPQGPAPQGPMSTSLILAVVVSTIASGIA
LICAGVILMWYRRKNDLHAVRGRLQSPEYKLSKIRSSTIMTDYNPNYCFAGKAASLSELK
EVPRKNITLLRALGHGAFGEVYEGQVLGMSGDNSSMHVAIKTLPEICSEQDEMDFLMEAL
IMSKFSHENIVRCIGVSLNILPRFILLELMTGGDMKSFLRQNRPRTGQTSSLTMRDLLRM
ARDIACGCRYLEENHFIHRDIAARNCLLTCPGPDRVAKIGDFGMARDIYRASYYRKGGRA
MLPVKWMPPEAFMEGIFTCKTDTWSFGVLLWEILSLGYMPYPCKTNQEVLEFVTSGGRMD
PPKGCPGPVYRIMTQCWQHCPEHRPNFSTILERINYCTQDPDVINTPLPVEYGPNTEDDG
GTVIRPSDHTSTSLTPLLVTHTVSQDSSSQLGLSPLGLGPTPLPPQPTKPRLLLQRTQPV
HHEVATCREALEPSWAEPVPAPGLSAAAAASGSHWLHPEPPHHRPCSRNSSSSGSQRLKN
KTKNLWNPTYGSWVLENFRGKKTLAHTQSMPLSSSSSSTANTQTCNPASESNEAGCDNAN
STHHSPSGLGTSATPSSSCQAQAAPSTSSHKTPAGGTAKAGMDLAKLQSFPCGNVNYAYD
EQSYEAESLPLVVPKASEAITNTSSAPSVSSGTSLGLALGLHTSSACMPKLLLKRHASYG
HEDVRRHTKAEKPTRDRDSGFSLSEDLSVTPI
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggattatataagaaaccaacagacttatctgtccatcgtcattttgctaattaactgt
acctgtcacgcccttttggacagatttcaggaggagcactcagatcagatcttttctcat
cacctggactcagaagatgacagccaaattacctcctgtgattttgagtcactgtgcctc
tggactttatcaaatcatagcgaccaaagtgactggtcagtggtgtctccacggcaacca
gaaagtgcacaggtcgggttgatgcctgagaccgaccactcagagggaagctctgatggg
cactttcttctcctaagctcctcccctgctgctgaggcctctgggagatgtgattaccac
ctaaccagcccagtcttgccaggaagcgacaggcactgcaccttgcagatggctctgtac
gagtcccatccagggttggggaatctcacgctcctgatcaaaccagttctctcagattca
gctgttcactctgtggtcctcaaccacaggaagcgagatgaccagagggccaagtgggaa
gtcctggagagtgtgattggccaggtggatgagccctttgaggtgactctcctctatact
tcctgtttgggggaagatggagtcactgtggctctggactctctagagctcatagactgt
gaatcagaacaccaggatgccatttgtggggaatctttccactgtgtaaattcagaagtc
tgcattgacccgagccaagtgtgtaacttccacaccgactgtccgtttggagaggatgag
ggcttcatctgtggtgctcttccgtttggctcacactgctcattcgaacaggattcatgt
ggttggtctgtctctaaccagcccttggcctggaggagggtcgctggagatgcacttttg
gagaaagaagacatgcagggtgtcactctgcagagtacaccagggcacttcttgtttttg
caggtaagagagagtaattcccttcgagaggcatctattcagagctcctctttccctcct
ccagtctctaccactgcctgccagatgcgcttctctctgtatatgcatggggactttaat
ggttcattgttggtggctatagaggagaatgggaccaccactgcaccactggtctgggaa
agaaattatcagtgggctgacgactgggaggatgttgccctgcagttgaccgaccttcat
cacgggttccacgtgaaggtgacagctgtgtgggaacaaggctcaaatgctgatgtggct
cttgatgacattgcactcggagcaagctgcttcagtacagatctcaactctctgctgccc
atgatgagcttggaggatatcttaagcccccttccagagccctcggcctcagaggtgtct
ttgatgacatggtggtttaactcatgcggcgccagcggtccccatggcccgacccaggcc
cagtgtgacagcacctacaggaacaaaaatgtcagtgttactgtggggaaggaaggctca
ttgaaaggagttcaaaaatggagggtgcctgctaccaacagatatttgatctctgcctat
ggagctgcaggagggaagggagccaaaaaccacaacaagcgcaaccacggggtcttcatc
tctgccatatttcctctcgagaaaggagatatactttatatcttggtgggccaccaggga
gaggacgcctgccctgggagaaatcctcacactcagaagatctgcctgggagagtcatca
gtgattgaagacgacctcaggggagaggctagcgcagagtgggctggaggaggaggtgga
ggagggggggctacttacatctttaagatggagaatggtgagctgatccccttactgatc
gcagctggtggaggaggaaatgcctacctggaggacccggagtccagtctggaccagata
ccacttgagcagtacgaaaatagcactctgcgtcccagtaccaacggtcgaaccggtgct
gcaggtggaggtggaggttggaaagacagccccagccctcacctgagagccggcaggtct
ctggtggagggtgcagagggagggtcgtcgtgtccactggccctgtccaagctcggctgg
tccacctacgggggttttggaggcggaggtggagcctgcacagctggtggtggcggagga
gggtacagaggaggtgacgcagcgctgacagatgagatcacagctgacggtcagaacgga
gtctcgttcattcatccaatgggagagattttcctgcagcctctggcagccatggagagt
cacggggagtgtgagatcaaagtgcagctgaactgcagccactgtcagacgcagagctgc
aaacgcgatgaagacactcaccttatcctctgtctctgcgaagaagatgaagtcctggcc
agcgacaatgttacatgtattggtactgtggcagcccctcaaggcccagctccgcagggg
ccaatgtcgacatcgctgatcctggctgtcgtggtctccaccatcgcgagcggcatcgcg
ctgatctgcgccggcgtcatccttatgtggtaccgcagaaagaatgacctgcatgcagtg
agggggcgtctgcagagtccagagtacaagctgagcaagatccgctcctccaccatcatg
acggactacaaccctaactactgctttgcagggaaggcagcctcactcagtgaactgaag
gaggtaccgcgcaagaacatcacacttctcagggctctcggccatggtgcatttggtgaa
gtctatgaagggcaagttctggggatgagcggtgataacagttccatgcacgttgcgata
aagactcttccagaaatctgctctgaacaggatgaaatggatttcctgatggaggcgctg
attatgagcaagttcagccatgagaacattgtgcgctgcattggcgtcagtctgaacatc
ttgcctcgcttcatcctgctggagctgatgactggaggagacatgaagagctttctgagg
cagaacaggccacgaactggccagacctcttctctcaccatgcgggatctgctgcggatg
gccagagacattgcctgtggctgtcgctacctggaggagaaccacttcatccacagagac
attgctgctagaaattgtctacttacctgccctggaccagacagagtggctaagattgga
gactttggcatggcacgagatatttacagagccagctattacaggaaaggtggtcgtgcc
atgctgccagtcaaatggatgccaccagaggcctttatggagggaatcttcacctgcaag
actgatacatggtcatttggagtgctgctttgggagatcctctctctgggctacatgcca
tatccttgtaaaaccaaccaggaggtgctggagtttgtcaccagcggaggcagaatggat
ccccctaagggctgcccggggcctgtctatcggatcatgactcagtgttggcagcactgt
cctgagcaccggcccaacttctcaactatcctggagagaattaactactgcactcaggac
ccagatgtgatcaacacacccctaccagtggaatacggccccaacacagaggatgatggc
ggcacagtaatccgtccttctgaccacacctccaccagcctcactccactccttgtgacc
cacactgtttcccaggattcctcctcccagctggggctctcccccctgggcctaggtcct
acgcctcttcctccacagcccaccaaacctcgtctgctcctccagagaacccaacctgtt
caccatgaagtggcgacgtgccgtgaggccctggagccgtcctgggccgagcctgttccc
gcccctgggttgtcagcagcagcagcagcatcaggaagccactggctccaccctgagcct
ccacaccaccggccttgctccagaaacagctcctcctcgggaagccagaggctgaagaac
aagactaagaacctgtggaaccccacatacggctcctgggttttggagaacttcaggggg
aagaaaacactggctcacactcagtccatgccactctcaagctcctcatcctccactgcc
aacacgcagacctgcaacccagcctcagagagcaacgaggccgggtgtgacaacgccaac
agcacccaccacagcccttctggcctcggtacttccgcaactccatcctcttcctgccag
gcccaagctgccccgagcacatcctcacacaagactccagcaggtgggaccgcaaaagct
ggcatggacctggctaaactgcagagtttcccctgcggcaacgtcaactatgcctacgat
gagcaaagctacgaggcagagagcctgcccctggttgtgcccaaagcctcagaagccatc
acaaacaccagctctgccccgagtgtctcctctgggactagcctgggtttggcgttgggc
ctccatacctcctcagcttgcatgcctaaactgctgctgaagcgccacgccagctacgga
cacgaggacgtgaggagacacaccaaagccgagaagcctacacgcgaccgagactcaggc
ttttctctgtccgaagacctcagcgttaccccaatctag
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integrated database retrieval system
