Lates calcarifer (barramundi perch): 108888719
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Entry
108888719 CDS
T04895
Name
(RefSeq) 3-ketoacyl-CoA thiolase, peroxisomal
KO
K07513
acetyl-CoA acyltransferase 1 [EC:
2.3.1.16
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00071
Fatty acid degradation
lcf00280
Valine, leucine and isoleucine degradation
lcf00592
alpha-Linolenic acid metabolism
lcf01040
Biosynthesis of unsaturated fatty acids
lcf01100
Metabolic pathways
lcf01212
Fatty acid metabolism
lcf03320
PPAR signaling pathway
lcf04146
Peroxisome
Module
lcf_M00087
beta-Oxidation
lcf_M00861
beta-Oxidation, peroxisome, VLCFA
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
108888719
00592 alpha-Linolenic acid metabolism
108888719
01040 Biosynthesis of unsaturated fatty acids
108888719
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108888719
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108888719
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108888719
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.16 acetyl-CoA C-acyltransferase
108888719
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiolase_N
Thiolase_C
ACP_syn_III_C
ketoacyl-synt
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
108888719
NCBI-ProteinID:
XP_018540346
UniProt:
A0A4W6DKT8
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Position
LG5:complement(722590..729183)
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AA seq
431 aa
AA seq
DB search
MHRLKIISGHLSPSGSSDYRRDLWRSECGSGSGSGRAGSSGPDDVVVVHGRRTAIGRAKR
GSFKDTTPDELLSAAMTAVLTDVGLSPNLLGDVCVGNVLQPGAGALMARVAHFLSGFPET
VPVYTVNRQCSSGLQALFNIAGAIRSKSIDLGLACGVESMSLRSIGNPGDLSSRLVDNDK
ARDCIIPMGITSENVAERFGVSREKQDAFALSSQQKAARAQSMGLFDQEIVPVTTKLVDD
GGKEREVTVHKDDGIRPGTTLAGLSKLRPAFKPDGSTTAGNSSQVSDGAAAVLIGRRSAV
EALGLPVLGVLRASAVVGVPPDVMGIGPAYAIPAALEQAGLTVADIDVFEINEAFASQAV
YCVEKLGIPAEKVNPNGGAIALGHPLGCTGARQVVTLLNELRRRGRRAYGVVSMCIGTGM
GAAAVFEYPGP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcacagattaaagataatttcaggtcacctgtctccgtccggttcctctgactacaga
cgggacttatggaggtcagagtgtggctccgggtccggatcagggcgcgcagggagcagc
ggtccggacgacgtggtggtggtccatggacggaggaccgctatcggcagagccaagaga
ggatccttcaaggacaccacacctgacgagctgctgagcgcggccatgacagctgtgctt
acagatgttggactgtcacccaacctgctgggggacgtctgtgtgggtaacgtgctgcag
cctggagccggagctctgatggccagagtggctcacttcctcagtgggtttccagagacc
gttccagtctacaccgtcaacagacagtgctcctccgggctgcaggctctgttcaacatc
gcaggagccattagaagcaaatccatcgacctgggcctcgcctgtggtgtggagagcatg
tcactgcgttcaataggaaaccctggagatctgagctccagactggtggacaacgacaag
gccagagactgcatcattcctatgggcatcacctcagagaacgttgcagagcggtttgga
gtctccagagagaagcaggacgccttcgctctcagctcccagcagaaagcagcccgggct
cagagtatgggcctgttcgaccaggagatcgttcccgtcaccaccaagttagtggacgat
ggcggtaaagagcgcgaggtgacggtgcataaagacgacggcatcagacctggaacaact
ctggcagggctgagtaaactcagaccggccttcaaacctgacggcagcaccacggcaggt
aactccagccaggtgagtgacggagcagcagccgtgctgattggtcgcaggtctgcggtt
gaggctctgggtctgccggtgctgggagtcctgagggccagtgcagtggtgggggtccct
cctgatgttatgggtattggaccggcgtatgccatccctgcagctctggaacaagccgga
ctgactgtggccgacatcgacgtgtttgaaatcaacgaggcctttgccagtcaggcggtg
tactgtgtggagaagctggggatcccagcggagaaggtgaatcctaacggcggagccatc
gccctgggtcaccctctgggctgcaccggagcccgacaggtggtgacgctgctcaacgag
ctcagacgtagaggacggagggcgtacggagtcgtgtccatgtgcattgggacggggatg
ggagctgctgccgtgttcgaataccccggaccttag
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