Lates calcarifer (barramundi perch): 108888815
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Entry
108888815 CDS
T04895
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108888815
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
108888815
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Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
108888815
NCBI-ProteinID:
XP_018540494
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Position
LG2:complement(2545179..2550750)
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AA seq
479 aa
AA seq
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MEMEEHAIKRPSKLWANLIPKRHMLTVSSLIAVCLGVGLGMSLKTFAHLSDLDKTYIGFP
GEILMRLLQLVTVPLIVSNVVTEICGLRVGTSRKITIRAIVYFVMTTLLSVTIGIMLVLL
VKPGVSQNAATVETDDDDDDDDEEAFSSVEALLDLIRNMVPTNLVLASFQQYKTQKVLVE
IEEGEYNASMVGKEVRLVGKYIDGLNTMGLIVWSVIFGLALRRMAERGKLFVDIVIAINV
ATKLVVRKIIGFLPIGVLFMTASYVVEVGDNWETVLKLGKFMLVVVSGLLVHGVIALPLI
YFLFVRHNPFIVIKGVFPALMKAMLISRSYAASLTFQCCEQVNMIDKRITRFMLPIGINI
NMDGTALYEVAAAIFIAQLNSIKLNWSQVFTMGVTVAVSSVGEAGIPSTGTVTTLFILTV
IGIPARDASLLLAIEWLLDRGNTAVNVLGDCLGVALVEHLSRKDLEEMDELGQYEILAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaagagcatgccataaagcgtcccagcaaactctgggctaacttgatcccc
aagagacatatgttaactgtttcaagtctgatagctgtttgcctgggggttggcctaggc
atgagtctgaagacctttgcccatctgtcagacctcgacaaaacctatattggttttcca
ggggagattctcatgcgcctgcttcagttggttactgttccgctcattgtgtcaaatgtg
gtaacggaaatttgtggtctgagagttggaacctccagaaaaatcaccatacgtgcaata
gtgtactttgtcatgaccactctcctgtccgttactataggaatcatgttggtactgttg
gtcaagcctggggtcagccaaaatgctgctacagttgagacagatgatgatgatgatgat
gatgatgaagaagccttctccagtgtcgaagccttgttggatctgataagaaacatggtg
ccaaccaatcttgttctggctagcttccaacagtacaagactcagaaggtgctggtcgaa
attgaagaaggcgaatacaatgcttccatggttgggaaggaggtgcgtctggtgggcaag
tatattgacggactcaacactatgggcctgattgtctggtctgttatttttgggctggcc
ctcagaagaatggcagaaagagggaaactctttgtggacatcgtcattgccatcaacgtg
gccactaagcttgtggttagaaagataatagggttcttgccgataggggtgttgttcatg
actgcgagctatgtcgttgaggttggggacaactgggagactgttttgaaattgggaaag
ttcatgttagtggttgtcagtgggctccttgtccatggagtaattgctctacccctgatc
tatttcctgtttgtgaggcataaccccttcattgtcattaaaggagtttttcctgcttta
atgaaggccatgctcatctcgcgcagctatgcggcctcgctgactttccagtgttgtgaa
caagtaaacatgattgacaaaagaatcactcgcttcatgctgcctattggcataaacatc
aatatggatggaacagccctttatgaagtggctgctgcaatcttcatcgcccaactcaac
agcatcaaactgaactggagccaggtatttaccatgggtgtgacagtagctgtgtccagc
gtaggagaagcagggatcccatctacaggaacagtcaccactctcttcattctgacagtc
attgggattcctgcaagggacgcctcccttttgttggctatagagtggctgctagatcgt
ggcaacactgctgtcaatgtcctgggagactgtctcggtgtagcgcttgttgagcatctg
tcaagaaaagatttggaggaaatggatgagctaggacagtatgagatactggccgcctga
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