Lates calcarifer (barramundi perch): 108888931
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Entry
108888931 CDS
T04895
Symbol
nrcama
Name
(RefSeq) neuronal cell adhesion molecule a isoform X1
KO
K06756
neuronal cell adhesion molecule
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108888931 (nrcama)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
C2-set_2
V-set
Pur_ac_phosph_N
BiPBP_C
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
108888931
NCBI-ProteinID:
XP_018540690
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Position
LG18:complement(1707082..1751383)
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AA seq
1291 aa
AA seq
DB search
MDRNRKWVPGIGAVLLILLSHMTSALEVPLDPKVLEGLPQPPTITLQSPKDYIFDPRENI
VIHCEAKGKPSPSFSWTRNGTHFDVEKDSKVLMKPGSGTLVIDISGEKAEAYEGTYQCTA
HNEHGTAVSNSIVIRQSRSPLWSKERNEAITVQVGAFLVLQCRPPAGLPPPVIFWMDNNF
QRLPLDKRVSQALNGDLYFSNVLPEDTRSDYICYARFPHTQTIQQKQPISVTVLNNSPEG
ERRPGFMLPLGPTSTKMVLRGDTLELECIAEGLPTPEISWTKDGGELPSSRMSFHNFKKT
LKISDVNEADAGDYRCTATNNLGIAHHIIKVTVKAAPFWVSAPRNLILAPNETGILTCRV
NGEPKPKISWFVNGVPIENVPEEHGRKVEDDTVILSNVQSGSSAVYQCNASNEFGYLLAN
AFVNVLAEPPRVLTPPNQVYQVITNSPALLHCSSFGSPIPTITWFKDSQTAIKDGDSYVI
HENGTLEISVAQLLNSGKYTCIATNNLGIKENHVFLEVKEPTRILKQPEYKVVQRGMSAM
FECKVKHDPSLIPTMTWLKDNGELPDDERFEVDTDSLTIKDVTDVDEGTYTCIMNTTLDQ
DSASAMLTVVEKPDPPSDLELTDQTERSVQLTWIPGDEHNSPTQKFLIQYEDLLHQPGVW
INLTEVAGTSTTAQLNLSPYVYYSFRVLAQNRVGHSDPSQPSRQYRTSPAAPDENPSDVQ
GVGTEPGNLVITWTPLTGFQSNGPGLEYRVQWRQKDMDDEWSSKNVANVSQFIVSGTPTF
VPYEIKVQALNDYGSGPEPEVVTGYSGEDFPVSGPDSVQVMVHNGTLAEVHWEPVLSPSV
RGKLQGYKVYYRRERGLHETEMDKDQQDQVLTFSGNRSEGRLPGLQPYSLYSLFITVLNN
KGEGPPSTSKTFETPEGVPGPPSFLKVINPGLDSLTLEWGSPVNNNGRLTGYTLKYQPVN
NTNELGPAKVMSFLANDTTVTLGNLNSSMLYKFYLSAKTIKGSGPIITEEAFTVMDTTRT
QPPVETGKGPTEPPHPTSPITQSLHPPFHKAPPVGPAFGTVNTSVSEDSAVISWEYFGHH
KNVYVEYIVENSKDDWKKELVNSSHSHMLKGLKPGTSYKVRVVARDPADPTVHSTDEVVV
TVPAVPSRQVDIATQGWFIGLMCAIALLILVLLIVCFIKRNKGGKYPVKEKEDAHQDPEI
QPMKEDDGTFGEYSDTEDHKPLKGSRTPSNGTVRRDESDDSLVDYGEGGDGQFNEDGSFI
GQYSGKKEKDTHEGNESSEAPSPVNAMNSFV
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggacaggaataggaagtgggtgccgggcatcggagctgtgctattgatactcttgagt
cacatgacgtcagcactagaagtgcctcttgatcctaaagtactggaaggattgccccaa
ccccccaccataacactccagtccccaaaggattacatctttgatccacgggagaacatc
gtcatccactgtgaagccaaggggaagccgagtcccagcttttcctggacgagaaatggg
acccactttgatgtcgagaaagactcaaaggtcctgatgaagcctggttcgggaactctg
gtcattgacatcagcggggaaaaggcggaggcctacgagggaacgtaccagtgtacggct
cacaatgagcatggcaccgctgtatccaacagcattgtcatcagacagtccaggtccccc
ttgtggtcaaaggaaagaaatgaggccatcacagtgcaggtgggggccttcctggtgctg
cagtgccgaccccctgccggcctgccccctcctgtcatcttctggatggataacaacttt
caaaggctgccgctggacaaacgagtgtcccaggccctgaacggagacttgtacttttcc
aacgttctgccagaagacaccaggagtgactacatctgctacgctcgcttccctcacaca
cagaccatccagcagaaacagcccatttcagtcactgtgctcaacaacagcccagagggg
gagcgtcgccccggtttcatgttgcctctgggtcccaccagcaccaagatggttctgaga
ggggacactctggagctggaatgcatcgctgagggcttgcccactccggagatctcctgg
actaaggatggaggtgaactgccaagcagcaggatgtccttccataacttcaagaaaaca
ctgaagatttctgatgtgaatgaagctgatgcaggcgactaccgctgtacggccacaaac
aacctgggcattgcacaccacatcatcaaggtcactgtcaaagcggctcctttctgggtc
agcgctcccaggaacctgatccttgctccgaatgagactggcatcctgacttgtcgagtc
aatggagaacccaaaccgaagattagctggtttgtcaatggagtccccatagagaatgtt
cctgaggaacatggccgtaaggtggaggatgacactgtgattctcagcaacgtacagtca
ggatccagtgccgtctaccagtgtaatgcatccaatgagtttggttacctgttggcgaac
gcttttgttaatgttcttgctgaaccaccaagggtgctcactccacccaaccaagtgtac
caggtcatcaccaacagccctgcactacttcactgttcctcctttggctcaccaatacca
accatcacatggttcaaagacagtcagaccgccattaaggatggtgactcatatgtgatc
catgagaatggcacactggagatcagtgtagcccagctactaaacagtggaaagtacacc
tgcattgccaccaacaacctggggatcaaggagaaccacgtcttcctggaggttaaagag
cccacccgtatcctaaagcagccagagtacaaggtggtgcagagaggaatgagcgccatg
ttcgagtgtaaagtcaaacatgacccttccctcattcccaccatgacatggctcaaagac
aatggagaactgccagatgatgagaggtttgaggtggacacagacagtctgaccatcaaa
gatgtgacagatgtagatgagggcacctacacctgcatcatgaacacaaccctggaccag
gactcagccagtgccatgctgactgttgttgaaaaacccgaccctccatcagacttggag
ctaacggaccaaacagagaggagcgttcagctaacgtggatccctggagatgaacacaac
agtcccacacagaagtttttgatccagtacgaggatctgctccaccagcccggagtttgg
atcaacctgaccgaggtcgctggcactagcaccacagcacagctaaacctctctccttat
gtctactactctttccgagtgctggctcagaatcgcgtgggccacagcgaccccagccag
ccctcgcgtcaatacaggaccagccccgcagctcctgatgaaaacccatcagatgttcag
ggagtaggaacagagcctggcaacttggtcatcacctggacaccactgacaggatttcag
tccaacggacctggtttggagtacagagtgcagtggagacagaaggacatggacgacgag
tggtcatcaaagaacgtggccaatgtttcccagtttatcgtgtctggaacccccaccttt
gttccgtacgaaattaaagttcaagctttgaatgattacggcagcggaccagagcctgaa
gtagtgactgggtactccggagaagattttcctgtgtctggccctgatagtgtgcaggtc
atggttcataatggcacgctggcagaggtacactgggagcctgtgttgtccccttcagtc
agaggaaaactacagggatacaaggtgtactatcgtcgtgagcggggcttacatgagaca
gagatggacaaagatcagcaggaccaggttctgacgttcagtgggaaccgtagtgagggg
cgtctgccgggcctccagccttacagcctctacagcctcttcataacggtccttaataac
aaaggagaagggcctccaagcaccagcaagacatttgagacgcctgagggagtcccgggg
ccgccttcttttctgaaggtcatcaaccctggtttggactctctcactctggaatggggc
tcaccagtgaataacaatggacgcctcactggatacacactgaaataccaaccagtcaac
aacaccaatgaactgggcccggccaaggtcatgagctttctagccaatgacaccacggtt
accctgggcaacctgaactccagcatgctgtacaagttttacttgagtgcaaagacaatc
aagggctctggccccatcatcacagaggaggccttcacagtcatggacacaactcgtact
cagccccctgtagagacgggcaaaggccccacagagccccctcacccaacctcccccatc
actcagtctctgcatcccccgtttcacaaggcgcctcctgtaggccctgcgtttggcaca
gttaacacgtctgtatcggaggacagtgcagtgatcagttgggaatactttggacaccat
aagaatgtatatgtggaatatattgtagaaaacagtaaagacgactggaaaaaggagttg
gtaaacagttcacactcgcatatgctaaaaggtttaaagccggggacgtcctataaggtg
cgtgtggtagctagagacccggctgacccgacggtccacagcacagacgaagtggtggtt
acagtgccagctgtgcccagccggcaggtagacatcgccacccagggctggtttattgga
ctgatgtgcgccatcgctcttcttatcttggtcctcctcatagtgtgcttcatcaagagg
aacaaaggtggcaaatatccagttaaagagaaagaagatgctcaccaagaccctgagatc
cagcccatgaaggaggatgatgggacatttggagaatacagtgacacagaggaccacaag
ccgctgaagggcagccggacgccgtccaacgggacggtgcgccgtgacgagagcgacgac
agcctggtggactatggggagggcggggacgggcagttcaacgaggacggctccttcatc
ggccagtacagcggcaagaaagagaaagacacgcacgaaggcaacgagagttcagaggcc
ccgtcgcccgtcaacgccatgaactcgtttgtctaa
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