Lates calcarifer (barramundi perch): 108889077
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Entry
108889077 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: somatostatin receptor type 5-like
KO
K04219
somatostatin receptor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108889077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108889077
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Peptide
Somatostatin
108889077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
7TM_GPCR_Srw
TAS2R
7tm_4
Motif
Other DBs
NCBI-GeneID:
108889077
NCBI-ProteinID:
XP_018540902
UniProt:
A0A4W6CWU0
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MEVIQATQVSLLPQETPAATWSNSSVPPYSHFLLLSTPSEPLLSFTPTNGSFIFNTCQNC
TGPEPGSLPGLAGIFIPLIYGIVCIVGLVGNTLVIHVVVNYTKNESVTNIYILNLAIADE
LFMLGLPFLAVQNALLFWPFGSLMCRVVMTVDAINQFTSIFCLTVMSVDRYLAVVHPIRS
SWWRRPHVAKAISATVWVGSFVVVLPVVVFADVLKDDGNCSIVWPEPAEVWKTSFIVYTS
TVGFFCPLLVICLCYLLIVIKVRSVGKRAQATSSRRRKSERKITRMVVVVVAVFVLCWLP
FYALNIVNLLEVLPGDFRGLYFFVLVLSYANSCANPILYGFLSDNFKRGFRKALCRTSRR
VKNNDRAGTEVPRPTEEWGGIVLQTQKCEGATNVHRKDCGENEEEEEISGTEGAMQMSEM
CKISENGNHSGVREGSRTQVIQRGKPEPGHSGELTGKGSDFDRADVMSTMASKSRNNRSQ
PEEFPDKNSVLEISYL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcatccaggccacccaggtttccttgctgcctcaggaaacccctgcagctacc
tggagcaacagctctgtccccccctactcccatttcctgctcctctccactccctctgaa
ccgcttctcagcttcactccaaccaatggctcttttatctttaacacctgtcagaactgt
actggacctgaacctggatcactccctggtttggcaggaatcttcattcctcttatctat
gggatagtctgcattgttggcttggtggggaatacactggtcattcatgttgtagtcaac
tacaccaagaatgaatcagtcaccaacatctatatccttaacttagccattgcagatgag
ctctttatgctgggcctgcccttcttggcggtacagaacgctctgcttttctggcccttt
ggctctctaatgtgccgtgtggtcatgacagtggacgccatcaaccagtttaccagtatc
ttctgcttaactgtgatgtcagtggaccgttacctggctgtggtgcaccctatccgctcc
tcctggtggcggcgtccccatgtggccaaggccatcagtgctacagtttgggtggggtcc
tttgtggtggtgctgccagtggtggtatttgctgatgtgctgaaggatgatgggaactgc
agcatcgtgtggcctgagccagcagaagtgtggaagacatctttcattgtgtacacgagc
actgttggtttcttctgccccctgctggtcatctgcttgtgctacctgctgatcgtcatt
aaggtacgaagtgttggaaaacgggcacaggccacatcctctcgacgcaggaagtcagag
cgtaaaatcacaaggatggtagttgttgtggtggcagtgtttgttctctgctggctaccg
ttctatgctctgaacattgtaaacctcttggaggtcctgccaggggacttcagggggctc
tacttctttgttcttgtgctctcatatgcaaacagctgtgccaaccccatactgtatgga
tttctgtctgacaacttcaagagaggcttcaggaaggccctgtgccgtacgtcacgcagg
gtgaagaacaacgacagggccggcactgaggtaccgcggcccacagaggagtggggtggc
attgtgcttcaaacacaaaagtgtgaaggagccaccaatgtgcacaggaaagactgtggt
gaaaatgaagaagaggaggaaatcagtggaacagaaggggccatgcagatgagtgaaatg
tgcaaaatatcagaaaacggaaaccacagtggagtaagagagggctcaaggacacaggtc
atacagaggggtaaacctgagccagggcactctggagaactgactggaaaaggctcagac
tttgatcgcgctgatgtaatgtccactatggccagtaaaagtagaaacaacaggtcacaa
cctgaagaattcccagacaaaaactctgtgcttgaaatcagctatctctaa
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