Lates calcarifer (barramundi perch): 108889387
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Entry
108889387 CDS
T04895
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108889387
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108889387
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108889387
03036 Chromosome and associated proteins [BR:
lcf03036
]
108889387
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108889387
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
108889387
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
108889387
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108889387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
108889387
NCBI-ProteinID:
XP_018541329
LinkDB
All DBs
Position
LG12:complement(23700274..23707094)
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AA seq
741 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQSPVYGFIFLFKWIEERRSRR
KVNTLVDETSVIDEEIVNDMFFAHQLIPNSCATHALLSVLLNCSGVELGTTLSRMKAFTK
GFSPESKGYAIGNAPELARAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRL
FELDGLKAYPIDHGPWGEEEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRMK
YESKLEILKRNRQTVLEGLQKMIRLTQPELVHDKKQQDSSSPDDGATTIKKEADTEPVTS
QADQASSDSIDESGGQSKEAPSPSGNTKVMGKPPVPAGVPPQVTNPIVQRLPAFLDNHNY
AKSPMQEEEDLAAGVGRSRMPGPPQQPYSDDEDDYEDDEEEVTASAGTSNRFRRKGSLRS
RPGRGGTGMESQIALSVLAEKLKKEAQRKDALNTPLSVRTEGRTGGICITSASQPSPTPS
NESTDTASEIGSAFNSPLRSPARSQAATRPSSPVASHLSRVLFGEDEMLRLDSRHNRAVR
ELGPSVSVALLHLQEDGVIYTLPPSVDSAADGTKRPCTPEKTKEKEQAGEKEGGKEGDEG
PSAEVKEEDSKDGAEVKPSKEKLNAMETAADSKPPGDKYSPKELLALLKCVEADIANYEV
YLKEEVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQNISVRRRQGVSIGR
LHKQRKPDRRKRSRPYKAKRQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggctggctggagctggagagtgatccagggctgttcactctactggtggaa
gattttggtgtcaaaggtgtccaggtagaggaaatctatgatcttcaaagcaagtgtcaa
agtcctgtctatggcttcatcttcctgttcaagtggatcgaggaacgtcgatccaggaga
aaagttaacacgctggtggatgagacctctgttattgatgaggaaattgtaaatgatatg
ttctttgctcatcagctgataccaaattcatgtgccacccacgccttgttgagtgtgctt
ctgaactgcagtggcgttgagcttggcaccacgcttagtcgcatgaaggctttcacaaaa
ggctttagtccagagagtaaaggttatgcaataggaaatgccccagagcttgccagagca
cataacagccatgccagaccggagcccaggcacctgccggaaaaacagaatgggatcagt
gcagtgcggaccatggaagccttccactttgttagctatgtgcccatcaaagaccgcctc
tttgagctcgatggactcaaggcttaccccattgaccatgggccttggggagaggaggag
gaatggactgataaagctcggcgagttatcatggagaggattggactggccactgctggt
gagccgtaccatgacatccgcttcaacctgatggcagtggtgcctgaccgcagaatgaag
tacgagtccaaactggaaattctaaagaggaatcgacagactgttctggagggtttacag
aagatgatccggctcactcagccagagctcgtccatgacaagaagcagcaggactcctcc
tctcctgatgatggtgccacgacaatcaagaaagaggcagatacggagccggttacatcc
caggctgaccaggcttcttcagattcaatagatgagtcaggaggtcaatccaaggaagct
cctagtccttcaggaaacactaaagtcatgggcaaaccaccagtccctgctggagttccc
ccacaagtcaccaaccccatcgttcagcgcctgcctgccttcctggacaaccacaactac
gccaagtctccaatgcaggaggaagaggatcttgctgctggagttggtcgctctcgtatg
ccggggcctccccagcaaccatactctgacgatgaagatgactatgaggatgatgaggag
gaagtaactgcttctgcaggcacctcaaacaggtttaggcggaaaggaagtctgcgctca
cgaccaggacggggtgggaccggaatggaaagccagattgccctgagtgtcctggctgag
aaactgaagaaagaggcccaaaggaaagatgccctaaatacacctctttccgtacgcaca
gaaggccgcaccggaggcatttgcatcacatctgcctcgcagccctcccccacacccagc
aacgagagcaccgacacggcctcggagattggcagcgccttcaattccccgctgcgctcg
cccgcacgctcccaggctgccacgcgcccgtccagtccagtcgcatcccatctgtcccgt
gtgctgttcggagaagatgagatgctgaggctagactccagacataaccgcgctgtaaga
gaactgggtccctctgtcagtgtagccttgttacacctgcaggaagatggagtcatctac
actctccctccatctgtagattcagctgctgatggtacaaagcggccttgtactcctgag
aagacaaaagagaaggagcaagcgggagagaaggaaggagggaaggagggagatgaggga
ccatctgcggaggtgaaagaagaggacagcaaagatggagcagaggtgaaacccagcaag
gaaaagctcaacgctatggaaactgctgcagacagcaagccccctggggataagtactca
ccaaaagagctgcttgcgctgcttaagtgtgttgaggctgacatcgccaattatgaggtg
tatctgaaagaagaagtggaaaagagaaagaaatacaaaattgacgatcagaggaggacc
cataattatgacgagttcatctgcacctttatatcaatgctggcccaagaaggaatgctg
gctagcctcgtggagcaaaacatttccgtgcgtcgacggcagggagtaagtatcggccgg
ttgcacaaacagaggaagcccgatcgcaggaaacgttcccggccttacaaagccaaacgc
cagtaa
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