Lates calcarifer (barramundi perch): 108889854
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Entry
108889854 CDS
T04895
Name
(RefSeq) actin nucleation-promoting factor WASL-like isoform X1
KO
K23612
neural Wiskott-Aldrich syndrome protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf04520
Adherens junction
lcf04810
Regulation of actin cytoskeleton
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108889854
09144 Cellular community - eukaryotes
04520 Adherens junction
108889854
09142 Cell motility
04810 Regulation of actin cytoskeleton
108889854
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108889854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108889854
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108889854
Membrane trafficking [BR:
lcf04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108889854
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
108889854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH1
Motif
Other DBs
NCBI-GeneID:
108889854
NCBI-ProteinID:
XP_018542026
LinkDB
All DBs
Position
LG12:complement(22049919..22054055)
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AA seq
344 aa
AA seq
DB search
MASSLVPGCHVMSDLLTIRERGILFTLLEPQCKLLKTTVAQVLEAKDTQGESPGWGYLGC
GVVCLIEDESVHSYFLRLYCVKRAKLLWEQEVYIPFKYTATRMFFHTFPADSHQIGFNFA
NQTEAEEFYLTVKAVQRKQENMTDMIKMTDTAADTSTSDPPDSGMKPVEHLDMDEQFPLD
APSSTVTPATSSFQDLDPAMRRLLMQAKLPVEDLKDKDIAEAVDCIINKFGGIKAVQREL
RNKGPVSQTLPRAAGASISIALKKRPLPPVPPIKGNTTSRQTPQHSDGVNLCLIPPPPPT
LAPADPERIRKSASFKHVGFSADPERGDLILNALREAFLQKQLQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagtctggttcctggatgtcatgtaatgagtgatctcctgacgatccgtgag
agaggcatcctcttcactctgctcgaacctcagtgtaagctgctcaaaactacagtagca
caggtactagaggccaaagacacccagggtgagagtccaggctggggttatttaggctgt
ggcgtggtgtgtctcattgaggatgagtctgttcactcttacttcctgcgtctctactgt
gtcaagcgtgccaagttactgtgggagcaggaggtgtacatcccattcaaatacactgca
actcgcatgttcttccatacctttcctgcagatagccaccagataggtttcaactttgca
aatcagacagaggcagaggaattctatcttacagtgaaggctgtccaacgaaagcaagaa
aacatgactgacatgattaagatgacagacactgcagcagacacctcaacaagtgaccca
cctgactcaggaatgaaaccagtggaacatttggacatggacgagcagttccctttggat
gcaccatcctctactgttacaccagccaccagttcatttcaggatctggatcccgctatg
agaagactcttgatgcaggcaaaactccctgtggaagacctgaaagacaaggacattgct
gaagctgttgactgcatcatcaacaaatttggaggaataaaggctgtgcagagagagttg
aggaacaaaggcccagtctcccagacattgccaagagctgcaggggcatccatctccata
gctctaaagaaaaggcctttgccaccggtccctcctatcaaaggcaacaccacctcccga
cagacaccacagcactcagatggagtaaacctgtgtctgattcctcctcctccgcctaca
ctagctccagctgatccagagagaatcagaaagagtgcaagtttcaaacatgtgggcttc
tcagcagatccagaaagaggtgacctcatcctaaatgcactgagagaagcgttcttacaa
aagcagctccagtga
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